RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 LIPJQ5W064 366 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 LETMD1Q6P1Q0 360 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 FRMD7Q6ZUT3 714 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 GPRIN3Q6ZVF9 776 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 PRSS41Q7RTY9 318 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 VN1R5Q7Z5H4 357 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 TMEM151BQ8IW70 566 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 CDYL2Q8N8U2 506 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 L3MBTL4Q8NA19 623 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 TRPV3Q8NET8 790 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 OR7G3Q8NG95 312 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 CREB3L4Q8TEY5 395 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 SREK1Q8WXA9 508 aaKnown RBP8.59□□□□□ -1.03
VCP-206ENST00000480327 UBE2E3Q969T4 207 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 TM4SF19Q96DZ7 209 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 C10orf90Q96M02 699 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 KCNA7Q96RP8 456 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 MTERF1Q99551 399 aaKnown RBP8.59□□□□□ -1.03
VCP-206ENST00000480327 NTMT1Q9BV86 223 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 SARGQ9BW04 601 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 GPR87Q9BY21 358 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 CHST8Q9H2A9 424 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 NT5DC2Q9H857 520 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 LUZP4Q9P127 313 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 ZNF225Q9UK10 706 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 FIS1Q9Y3D6 152 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 TIMM22Q9Y584 194 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 PCDHGA9Q9Y5G4 932 aaKnown RBP8.59□□□□□ -1.03
VCP-206ENST00000480327 MAU2Q9Y6X3 613 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 A0A1B0GX78 115 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 ZNF860A6NHJ4 632 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 HMGB1P1B2RPK0 211 aaPredicted RBP8.58□□□□□ -1.04
VCP-206ENST00000480327 TCP11X1B4DZS4 312 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 C4orf51C9J302 202 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 SGK494L7N484 410 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 MEN1O00255 615 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 SAP18O00422 153 aaKnown RBP8.58□□□□□ -1.04
VCP-206ENST00000480327 TXNDC9O14530 226 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 DSCR3O14972 297 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 UGDHO60701 494 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 VPS4BO75351 444 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 CRCPO75575 148 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 LYPLA1O75608 230 aaPredicted RBP8.58□□□□□ -1.04
VCP-206ENST00000480327 AGFG2O95081 481 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 MLYCDO95822 493 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 KLK3P07288 261 aaPredicted RBP8.58□□□□□ -1.04
VCP-206ENST00000480327 CHRNGP07510 517 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 HBQ1P09105 142 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 ZNF888P0CJ79 500 aaPredicted RBP8.58□□□□□ -1.04
VCP-206ENST00000480327 IL1RNP18510 177 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 BGNP21810 368 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 COL8A1P27658 744 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 SERPINB3P29508 390 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 HMOX2P30519 316 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 HNRNPH1P31943 449 aaKnown RBP8.58□□□□□ -1.04
VCP-206ENST00000480327 RORAP35398 523 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 OR1D4P47884 311 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 CCL11P51671 97 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 PGDP52209 483 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 FOXA1P55317 472 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 RAB8AP61006 207 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 RPS13P62277 151 aaKnown RBP8.58□□□□□ -1.04
VCP-206ENST00000480327 RGS1Q08116 209 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 PCDH1Q08174 1060 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 HYAL2Q12891 473 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 IFT88Q13099 833 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 MRPL49Q13405 166 aaKnown RBP8.58□□□□□ -1.04
VCP-206ENST00000480327 E2F2Q14209 437 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 NDUFA9Q16795 377 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 MUM1Q2TAK8 710 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 FAM214AQ32MH5 1076 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 FHL5Q5TD97 284 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 MLIPQ5VWP3 458 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 CES4AQ5XG92 561 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 RHBDD2Q6NTF9 364 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 TMEM214Q6NUQ4 689 aaKnown RBP8.58□□□□□ -1.04
VCP-206ENST00000480327 SCIMPQ6UWF3 145 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 LAS2Q8IYD9 372 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 DSELQ8IZU8 1212 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 SHISA5Q8N114 240 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 RBMXL3Q8N7X1 1067 aaKnown RBP8.58□□□□□ -1.04
VCP-206ENST00000480327 FDCSPQ8NFU4 85 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 TTLQ8NG68 377 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 OR9A4Q8NGU2 314 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 HUS1BQ8NHY5 278 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 METTL6Q8TCB7 284 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 NT5CQ8TCD5 201 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 AGR3Q8TD06 166 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 AGAP11Q8TF27 550 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 ZNF473Q8WTR7 871 aaKnown RBP8.58□□□□□ -1.04
VCP-206ENST00000480327 SSC4DQ8WTU2 575 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 THAP4Q8WY91 577 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 MMABQ96EY8 250 aaPredicted RBP8.58□□□□□ -1.04
VCP-206ENST00000480327 F2RL3Q96RI0 385 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 ZNF382Q96SR6 550 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 HBEGFQ99075 208 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 SLC25A23Q9BV35 468 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 NUDT9Q9BW91 350 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 YIPF2Q9BWQ6 316 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 PITHD1Q9GZP4 211 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms