RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 RNF39Q9H2S5 420 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 CISHQ9NSE2 258 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 OBP2AQ9NY56 170 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 ZNF69Q9UC07 566 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 CENPBD1B2RD01 187 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 NDST3O95803 873 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 NFYBP25208 207 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 CXADRP78310 365 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 ZNF598Q86UK7 904 aaKnown RBP8.68□□□□□ -1.02
TTC3-216ENST00000479930 FAM83FQ8NEG4 500 aaPredicted RBP8.68□□□□□ -1.02
TTC3-216ENST00000479930 ZNF559Q9BR84 538 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 MED18Q9BUE0 208 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 PCDHA3Q9Y5H8 950 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 ZC3H13Q5T200 1668 aaKnown RBP8.68□□□□□ -1.02
TTC3-216ENST00000479930 TRAF3IP2O43734 574 aaPredicted RBP8.68□□□□□ -1.02
TTC3-216ENST00000479930 C8orf89P0DMQ9 161 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 MC3RP41968 323 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 FAM214AQ32MH5 1076 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 RNF148Q8N7C7 305 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 OR52E4Q8NGH9 312 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 SMAP2Q8WU79 429 aaPredicted RBP8.68□□□□□ -1.02
TTC3-216ENST00000479930 GPR62Q9BZJ7 368 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 ANKMY1Q9P2S6 941 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 ADGRE2Q9UHX3 823 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 KIF13AQ9H1H9 1805 aa8.68□□□□□ -1.02
TTC3-216ENST00000479930 CTSKP43235 329 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 HTR3AP46098 478 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 F2RL1P55085 397 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 RNF111Q6ZNA4 994 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 OR5L2Q8NGL0 311 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 ZPBPQ9BS86 351 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 EMC9Q9Y3B6 208 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 USP3Q9Y6I4 520 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 PPLO60437 1756 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 MTX2O75431 263 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 GNAO1P09471 354 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 SPTBP11277 2137 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 EFNA1P20827 205 aaPredicted RBP8.67□□□□□ -1.02
TTC3-216ENST00000479930 VIPR1P32241 457 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 DEFA5Q01523 94 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 DMTNQ08495 405 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 SEMA5AQ13591 1074 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 GFRALQ6UXV0 394 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 GPRIN3Q6ZVF9 776 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 PLXDC1Q8IUK5 500 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 EIF1ADQ8N9N8 165 aaKnown RBP8.67□□□□□ -1.02
TTC3-216ENST00000479930 ELP5Q8TE02 316 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 HDAC2Q92769 488 aaKnown RBP8.67□□□□□ -1.02
TTC3-216ENST00000479930 TSACCQ96A04 125 aaPredicted RBP8.67□□□□□ -1.02
TTC3-216ENST00000479930 RANBP3Q9H6Z4 567 aaPredicted RBP8.67□□□□□ -1.02
TTC3-216ENST00000479930 CNTN3Q9P232 1028 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 SLC17A6Q9P2U8 582 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 PCDHGC4Q9Y5F7 938 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 NUP214P35658 2090 aaPredicted RBP8.67□□□□□ -1.02
TTC3-216ENST00000479930 OR6C74A6NCV1 312 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 LRRC30A6NM36 301 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 AKAP3O75969 853 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 MNX1P50219 401 aaPredicted RBP8.67□□□□□ -1.02
TTC3-216ENST00000479930 CCR8P51685 355 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 CNKSR3Q6P9H4 555 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 ZNF704Q6ZNC4 412 aaPredicted RBP8.67□□□□□ -1.02
TTC3-216ENST00000479930 MUC15Q8N387 334 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 SORCS2Q96PQ0 1159 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 HCAR1Q9BXC0 346 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 AASSQ9UDR5 926 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 PPM1HQ9ULR3 514 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 A8MVM7 634 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 MMP20O60882 483 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 PRKCGP05129 697 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 PEPDP12955 493 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 CD1CP29017 333 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 TRIM23P36406 574 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 ZNF445P59923 1031 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 GAS6Q14393 721 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 MARCH8Q5T0T0 291 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 MROH2BQ7Z745 1585 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 TMEM110Q86TL2 294 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 TCAIMQ8N3R3 496 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 LINC00116Q8NCU8 138 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 OXER1Q8TDS5 423 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 CDK5RAP2Q96SN8 1893 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 TTTY10Q9BZA0 68 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 SPACA1Q9HBV2 294 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 EI24O14681 340 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 RNASE1P07998 156 aaKnown RBP8.67□□□□□ -1.02
TTC3-216ENST00000479930 KCNJ1P48048 391 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 GINS1Q14691 196 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 C3P1Q6ZMU1 363 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 TPCN2Q8NHX9 752 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 FUBP1Q96AE4 644 aaKnown RBP8.67□□□□□ -1.02
TTC3-216ENST00000479930 PGAP3Q96FM1 320 aaPredicted RBP8.67□□□□□ -1.02
TTC3-216ENST00000479930 UCKL1Q9NWZ5 548 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 GNG8Q9UK08 70 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 STUB1Q9UNE7 303 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 MMACHCQ9Y4U1 282 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 SCN1AP35498 2009 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 OR4K15Q8NH41 348 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 APOLD1Q96LR9 279 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 ULBP3Q9BZM4 244 aa8.67□□□□□ -1.02
TTC3-216ENST00000479930 TTYH3Q9C0H2 523 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms