RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 CLMPQ9H6B4 373 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 ESRP2Q9H6T0 727 aaKnown RBP20.41■□□□□ 0.86
SDF4-206ENST00000478938 PADI2Q9Y2J8 665 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 POM121CA8CG34 1229 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 H0YC42 278 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 INPPL1O15357 1258 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 LRRTM2O43300 516 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 TOXO94900 526 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 STAU1O95793 577 aaKnown RBP20.41■□□□□ 0.86
SDF4-206ENST00000478938 HBQ1P09105 142 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 ZNF91Q05481 1191 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 PAQR6Q6TCH4 344 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 TMIGD1Q6UXZ0 262 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 RRM2BQ7LG56 351 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 GPR155Q7Z3F1 870 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 TRIM69Q86WT6 500 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 METTL23Q86XA0 190 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 OR2T4Q8NH00 348 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 ATG4CQ96DT6 458 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 DPH2Q9BQC3 489 aaPredicted RBP20.41■□□□□ 0.86
SDF4-206ENST00000478938 YARS2Q9Y2Z4 477 aaKnown RBP20.41■□□□□ 0.86
SDF4-206ENST00000478938 KRBOX1C9JBD0 128 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 MAFKO60675 156 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 PXNP49023 591 aaPredicted RBP20.41■□□□□ 0.86
SDF4-206ENST00000478938 TEAD4Q15561 434 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 USP39Q53GS9 565 aaKnown RBP20.41■□□□□ 0.86
SDF4-206ENST00000478938 BICRALQ6AI39 1079 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 OR10G2Q8NGC3 310 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 AARSD1Q9BTE6 412 aaKnown RBP20.41■□□□□ 0.86
SDF4-206ENST00000478938 POLR2J2Q9GZM3 115 aaKnown RBP20.41■□□□□ 0.86
SDF4-206ENST00000478938 TKTL2Q9H0I9 626 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 RPS6KA6Q9UK32 745 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 FAM74A7A6NL05 159 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 J3KR12 359 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 FFAR3O14843 346 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 SIGLEC5O15389 551 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 YKT6O15498 198 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 GPR42O15529 346 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 SDHBP21912 280 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 DNASE1P24855 282 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 KDELR2P33947 212 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 SIGLEC14Q08ET2 396 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 GPR176Q14439 515 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 FAM74A3Q4VXF1 159 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 ARHGAP12Q8IWW6 846 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 MS4A3Q96HJ5 214 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 COPZ2Q9P299 210 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 TSC2P49815 1807 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 RGS11O94810 467 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 CTBP2P56545 445 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 MAXP61244 160 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 BTG1P62324 171 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 PPIGQ13427 754 aaKnown RBP eCLIP20.4■□□□□ 0.86
SDF4-206ENST00000478938 CAMK2DQ13557 499 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 ASB18Q6ZVZ8 466 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 OR52P1PQ8NH57 321 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 POP5Q969H6 163 aaKnown RBP20.4■□□□□ 0.86
SDF4-206ENST00000478938 SOSTQ9BQB4 213 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 KATNB1Q9BVA0 655 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 KCTD5Q9NXV2 234 aa20.4■□□□□ 0.86
SDF4-206ENST00000478938 CNOT2Q9NZN8 540 aaKnown RBP20.4■□□□□ 0.86
SDF4-206ENST00000478938 A0A0B4J203 849 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 TNFRSF11BO00300 401 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 GLP2RO95838 553 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 HLA-EP13747 358 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 MAPK1P28482 360 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 PTPN6P29350 595 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 BLVRAP53004 296 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 GPR17Q13304 367 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 MPPE1Q53F39 396 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 ALFQ53S48 1182 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 FIP1L1Q6UN15 594 aaKnown RBP20.39■□□□□ 0.85
SDF4-206ENST00000478938 ADGRF3Q8IZF5 1079 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 INTS12Q96CB8 462 aaKnown RBP20.39■□□□□ 0.85
SDF4-206ENST00000478938 C7orf34Q96L11 122 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 IER2Q9BTL4 223 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 TSR3Q9UJK0 312 aaKnown RBP20.39■□□□□ 0.85
SDF4-206ENST00000478938 FBXL2Q9UKC9 423 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 CCL27Q9Y4X3 112 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 STON1Q9Y6Q2 735 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 PCNTO95613 3336 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 ZNF236Q9UL36 1845 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 LCHNA4D1U4 455 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 YJEFN3A6XGL0 299 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 ZBTB42B2RXF5 422 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 KPNA5O15131 536 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 NDUFS6O75380 124 aaKnown RBP20.39■□□□□ 0.85
SDF4-206ENST00000478938 EPOP01588 193 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 OR56A5P0C7T3 313 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 CHRNA5P30532 468 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 CCR1P32246 355 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 SGO1Q5FBB7 561 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 MPP7Q5T2T1 576 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 DPYSL5Q9BPU6 564 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 FAM124BQ9H5Z6 455 aaPredicted RBP20.39■□□□□ 0.85
SDF4-206ENST00000478938 GPRC5BQ9NZH0 403 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 MED16Q9Y2X0 877 aa20.39■□□□□ 0.85
SDF4-206ENST00000478938 LOC105369274A0A096LPK9 316 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 A8MXK9 166 aa20.38■□□□□ 0.85
SDF4-206ENST00000478938 MATN3O15232 486 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms