RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TSNARE1Q96NA8 513 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 NDNQ99608 321 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 FOXC2Q99958 501 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 HAUS8Q9BT25 410 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 KIFC1Q9BW19 673 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 FAM129AQ9BZQ8 928 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 LIN28AQ9H9Z2 209 aaKnown RBP6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 NECTIN3Q9NQS3 549 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 PRDM9Q9NQV7 894 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 C20orf96Q9NUD7 363 aaPredicted RBP6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 HPF1Q9NWY4 346 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 ST6GALNAC2Q9UJ37 374 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 ACAD8Q9UKU7 415 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 EDARQ9UNE0 448 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 SLC22A7Q9Y694 548 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 MAD1L1Q9Y6D9 718 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 ABCA4P78363 2273 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 ACANP16112 2415 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 A0A0G2JMM0 328 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 A0A0G2JN53 185 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 A0A0G2JNJ9 132 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 A0A1B0GTL3 188 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 MYOCOSA0A1B0GUC4 107 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 ATP6AP2A0A1C7CYW4 349 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 A0A1W2PPB8 328 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 A0A1W2PRS3 328 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 TCRBV7S3A2A0A539 114 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 TCRBV16S1A1N1A0A5B0 115 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 TRBC2A0A5B9 178 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 PINLYPA6NC86 204 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 URADA6NGE7 173 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 KIR3DP1A8MWS1 328 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 GFYI3L273 518 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 WWP2O00308 870 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 NRDCO43847 1150 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 ATP6AP2O75787 350 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 OR2J2O76002 312 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 GUCA1CO95843 209 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 IFNA16P05015 189 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 C8GP07360 202 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 ADSLP30566 484 aaPredicted RBP6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 TRHRP34981 398 aaPredicted RBP6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 KIR2DL3P43628 341 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 KCNJ1P48048 391 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 MAN2A2P49641 1150 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 GPS1Q13098 491 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 CSHL1Q14406 222 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 RBBP5Q15291 538 aaKnown RBP6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 PHKG1Q16816 387 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 ZNF750Q32MQ0 723 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 EMC4Q5J8M3 183 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 TOR1AIP1Q5JTV8 583 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 CATSPEREQ5SY80 951 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 LRRC8EQ6NSJ5 796 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 UGT3A1Q6NUS8 523 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 NIPAL1Q6NVV3 410 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 ZNF549Q6P9A3 640 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 LCTLQ6UWM7 567 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 ARSKQ6UWY0 536 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 C4orf22Q6V702 233 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 GK5Q6ZS86 529 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 FAM47EQ6ZV65 393 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 CLNKQ7Z7G1 428 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 TMPRSS11BQ86T26 416 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 SLC22A16Q86VW1 577 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 ZFP62Q8NB50 900 aaPredicted RBP6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 B3GNT7Q8NFL0 401 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 OR2M7Q8NG81 312 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 C16orf52Q8NHV5 167 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 CREB3L4Q8TEY5 395 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 EEF1AKMT1Q8WVE0 214 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 SLCO2A1Q92959 643 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 LINGO1Q96FE5 620 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 VMP1Q96GC9 406 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 BAG1Q99933 345 aaPredicted RBP6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 TTYH2Q9BSA4 534 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 TRIM54Q9BYV2 358 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 TTTY12Q9BZ98 90 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 PARVBQ9HBI1 364 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 IARS2Q9NSE4 1012 aaKnown RBP6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 ARL15Q9NXU5 204 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 ZFATQ9P243 1243 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 Q9UFV3 132 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 GUCA1BQ9UMX6 200 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 PDE10AQ9Y233 779 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 DHRS7Q9Y394 339 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 DYRK1BQ9Y463 629 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 LIPGQ9Y5X9 500 aa6.22□□□□□ -1.41
RTFDC1-206ENST00000477485 HRNRQ86YZ3 2850 aaPredicted RBP6.21□□□□□ -1.41
RTFDC1-206ENST00000477485 NINQ8N4C6 2090 aa6.21□□□□□ -1.41
RTFDC1-206ENST00000477485 FAM221AA4D161 298 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 CDK2AP1O14519 115 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 BCKDKO14874 412 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 CTAG2O75638 210 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 FAM155BO75949 473 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 ZFAND5O76080 213 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 HAUS5O94927 633 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 OR6B1O95007 311 aa6.21□□□□□ -1.42
RTFDC1-206ENST00000477485 FGGP02679 453 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms