RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 WASHC1A8K0Z3 465 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 MAGEB17A8MXT2 336 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 UBFD1O14562 309 aaKnown RBP11.72□□□□□ -0.53
APTX-220ENST00000476858 SPAG7O75391 227 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 PRKRAO75569 313 aaKnown RBP11.72□□□□□ -0.53
APTX-220ENST00000476858 CEACAM4O75871 244 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 OR4F21O95013 312 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 HEXBP07686 556 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 MAOAP21397 527 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 PPP2R1BP30154 601 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 HTR6P50406 440 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 HERC3Q15034 1050 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 RASA2Q15283 850 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 MINDY4Q4G0A6 757 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 ZNF678Q5SXM1 525 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 MFSD4BQ5TF39 518 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 MED27Q6P2C8 311 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 TMEM205Q6UW68 189 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 ATG14Q6ZNE5 492 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 TRABD2AQ86V40 505 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 TBC1D19Q8N5T2 526 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 OR2L5Q8NG80 312 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 OR4F6Q8NGB9 312 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 C9orf43Q8TAL5 461 aaPredicted RBP11.72□□□□□ -0.53
APTX-220ENST00000476858 WDR20Q8TBZ3 569 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 GAL3ST3Q96A11 431 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 KCNA7Q96RP8 456 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 HBEGFQ99075 208 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 WDR77Q9BQA1 342 aaPredicted RBP11.72□□□□□ -0.53
APTX-220ENST00000476858 ZNF717Q9BY31 904 aaPredicted RBP11.72□□□□□ -0.53
APTX-220ENST00000476858 FAM117AQ9C073 453 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 REXO4Q9GZR2 422 aaKnown RBP11.72□□□□□ -0.53
APTX-220ENST00000476858 GSTO2Q9H4Y5 243 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 DMRT3Q9NQL9 472 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 NECTIN3Q9NQS3 549 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 SEMA3GQ9NS98 782 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 LGALS13Q9UHV8 139 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 CSAG2Q9Y5P2 127 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 IGHV1-45A0A0A0MS14 117 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 ARHGAP10A1A4S6 786 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 CDH16O75309 829 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 EEDO75530 441 aaKnown RBP11.71□□□□□ -0.53
APTX-220ENST00000476858 SEC24DO94855 1032 aaPredicted RBP11.71□□□□□ -0.53
APTX-220ENST00000476858 FHP07954 510 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 CHN1P15882 459 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 CXCR2P25025 360 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 CRHR1P34998 444 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 PRKAA2P54646 552 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 SGO1Q5FBB7 561 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 ZYG11AQ6WRX3 759 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 RIPOR1Q6ZS17 1223 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 ABHD13Q7L211 337 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 ANKRD37Q7Z713 158 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 SRRM1Q8IYB3 904 aaKnown RBP11.71□□□□□ -0.53
APTX-220ENST00000476858 BANPQ8N9N5 519 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 FAM47BQ8NA70 645 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 ZIM3Q96PE6 472 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 MAPKAP1Q9BPZ7 522 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 C1QTNF3Q9BXJ4 246 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 SLC25A18Q9H1K4 315 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 ZNF552Q9H707 407 aaPredicted RBP11.71□□□□□ -0.53
APTX-220ENST00000476858 MLXIPLQ9NP71 852 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 C14orf105Q9NVL8 296 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 KCMF1Q9P0J7 381 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 LUZP4Q9P127 313 aa11.71□□□□□ -0.53
APTX-220ENST00000476858 NXT1Q9UKK6 140 aaKnown RBP11.71□□□□□ -0.53
APTX-220ENST00000476858 TNPO3Q9Y5L0 923 aaKnown RBP11.71□□□□□ -0.53
APTX-220ENST00000476858 TLN1Q9Y490 2541 aaKnown RBP11.71□□□□□ -0.53
APTX-220ENST00000476858 LOC102723996A0A087X1L8 192 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 H0YIV9 168 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 PEX12O00623 359 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 PLPP1O14494 284 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 PRPF4O43172 522 aaKnown RBP eCLIP11.7□□□□□ -0.54
APTX-220ENST00000476858 GLRA3O75311 464 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 SUPT7LO94864 414 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 CLDN9O95484 217 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 GBAP04062 536 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 GSTA1P08263 222 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 ACPPP15309 386 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 ATP5F1P24539 256 aaPredicted RBP11.7□□□□□ -0.54
APTX-220ENST00000476858 ATP5A1P25705 553 aaKnown RBP11.7□□□□□ -0.54
APTX-220ENST00000476858 ARL1P40616 181 aaPredicted RBP11.7□□□□□ -0.54
APTX-220ENST00000476858 CCNG1P51959 295 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 FOXA1P55317 472 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 STXBP1P61764 594 aaKnown RBP11.7□□□□□ -0.54
APTX-220ENST00000476858 HERVK_113P63132 956 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 CLCQ05315 142 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 LAPTM5Q13571 262 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 PCLAFQ15004 111 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 TUBB8Q3ZCM7 444 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 NADK2Q4G0N4 442 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 PAGE2BQ5JRK9 111 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 KHDRBS2Q5VWX1 349 aaKnown RBP11.7□□□□□ -0.54
APTX-220ENST00000476858 LIPJQ5W064 366 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 CES4AQ5XG92 561 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 MED25Q71SY5 747 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 CLNKQ7Z7G1 428 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 IQCKQ8N0W5 287 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 GALNT16Q8N428 558 aa11.7□□□□□ -0.54
APTX-220ENST00000476858 TMEM102Q8N9M5 508 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms