RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 CD22P20273 847 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 NME2P22392 152 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 JAK1P23458 1154 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 HTR1EP28566 365 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 EEF1DP29692 281 aaKnown RBP6.56□□□□□ -1.36
HDAC3-207ENST00000475549 SSTR1P30872 391 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 TRHRP34981 398 aaPredicted RBP6.56□□□□□ -1.36
HDAC3-207ENST00000475549 GGT5P36269 586 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 KIR3DL1P43629 444 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 ARL4CP56559 192 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 CDKL1Q00532 357 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 ALDH6A1Q02252 535 aaKnown RBP6.56□□□□□ -1.36
HDAC3-207ENST00000475549 OC90Q02509 493 aaPredicted RBP6.56□□□□□ -1.36
HDAC3-207ENST00000475549 RGS1Q08116 209 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 RBBP5Q15291 538 aaKnown RBP6.56□□□□□ -1.36
HDAC3-207ENST00000475549 TGFBIQ15582 683 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 TRADDQ15628 312 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 MAPKAPK3Q16644 382 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.56□□□□□ -1.36
HDAC3-207ENST00000475549 ADPRMQ3LIE5 342 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 KRTCAP3Q53RY4 240 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 XKR6Q5GH73 641 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 TOR1AIP1Q5JTV8 583 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 TMIGD1Q6UXZ0 262 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 C3P1Q6ZMU1 363 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 BNC2Q6ZN30 1099 aaPredicted RBP6.56□□□□□ -1.36
HDAC3-207ENST00000475549 SYDE1Q6ZW31 735 aaPredicted RBP6.56□□□□□ -1.36
HDAC3-207ENST00000475549 MDGA2Q7Z553 956 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 UBE3DQ7Z6J8 389 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 TMPRSS11BQ86T26 416 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 DOLPP1Q86YN1 238 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 SCUBE1Q8IWY4 988 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 KLHDC8AQ8IYD2 350 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 ZNF295-AS1Q8N0V1 137 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 LGI4Q8N135 537 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 NKAPQ8N5F7 415 aaKnown RBP6.56□□□□□ -1.36
HDAC3-207ENST00000475549 SLC5A8Q8N695 610 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 TRPV3Q8NET8 790 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 GABPB2Q8TAK5 448 aaPredicted RBP6.56□□□□□ -1.36
HDAC3-207ENST00000475549 VPS39Q96JC1 886 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 QRFPRQ96P65 431 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 AIF1LQ9BQI0 150 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 TMEM79Q9BSE2 394 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 RHBGQ9H310 441 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 LIN28AQ9H9Z2 209 aaKnown RBP6.56□□□□□ -1.36
HDAC3-207ENST00000475549 GRPEL1Q9HAV7 217 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 CLK4Q9HAZ1 481 aaKnown RBP6.56□□□□□ -1.36
HDAC3-207ENST00000475549 PRDM9Q9NQV7 894 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 CORO1CQ9ULV4 474 aaPredicted RBP6.56□□□□□ -1.36
HDAC3-207ENST00000475549 MEMO1Q9Y316 297 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 SNX24Q9Y343 169 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 KCNE2Q9Y6J6 123 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 MYOCOSA0A1B0GUC4 107 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 NCF1BA6NI72 391 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-207ENST00000475549 SAGE2PA6NJ88 616 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 ENO4A6NNW6 628 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 NCF1CA8MVU1 366 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-207ENST00000475549 PHGDHO43175 533 aaKnown RBP6.55□□□□□ -1.36
HDAC3-207ENST00000475549 ZNF354AO60765 605 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-207ENST00000475549 MYO1DO94832 1006 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 WDR47O94967 919 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 SNRPB2P08579 225 aaKnown RBP6.55□□□□□ -1.36
HDAC3-207ENST00000475549 MYBL2P10244 700 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 RNH1P13489 461 aaKnown RBP6.55□□□□□ -1.36
HDAC3-207ENST00000475549 NCF1P14598 390 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-207ENST00000475549 CD1DP15813 335 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 PTGER1P34995 402 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 RFC3P40938 356 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 CYB561P49447 251 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 HNMTP50135 292 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 HLCSP50747 726 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 PLA2G16P53816 162 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 GPX6P59796 221 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 GNG11P61952 73 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 SLBPQ14493 270 aaKnown RBP eCLIP6.55□□□□□ -1.36
HDAC3-207ENST00000475549 OR4D1Q15615 310 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 NIPAL1Q6NVV3 410 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 ABHD17CQ6PCB6 329 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 RPTNQ6XPR3 784 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 CAPN12Q6ZSI9 719 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 SULF2Q8IWU5 870 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 ZBED8Q8IZ13 594 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 MARVELD2Q8N4S9 558 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 ZNF808Q8N4W9 903 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-207ENST00000475549 ZNF321PQ8N8H1 164 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 TMEM178AQ8NBL3 297 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 B3GNT7Q8NFL0 401 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 AGAP11Q8TF27 550 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 PTPMT1Q8WUK0 201 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-207ENST00000475549 PDLIM2Q96JY6 352 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 UBXN10Q96LJ8 280 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 DMRTA2Q96SC8 542 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 CSF3RQ99062 836 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 KRT12Q99456 494 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 TRIM8Q9BZR9 551 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 DERL2Q9GZP9 239 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 RHOJQ9H4E5 214 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 GPAMQ9HCL2 828 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 PRDM7Q9NQW5 492 aa6.55□□□□□ -1.36
HDAC3-207ENST00000475549 DEPPQ9NTK1 212 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms