RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 NADK2Q4G0N4 442 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 ADNP2Q6IQ32 1131 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 LANCL3Q6ZV70 420 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 VN1R5Q7Z5H4 357 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 LCA5Q86VQ0 697 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 LAS2Q8IYD9 372 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 OR7G3Q8NG95 312 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 ACMSDQ8TDX5 336 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 PPP4R1Q8TF05 950 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 CMTM7Q96FZ5 175 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 PTCHD1Q96NR3 888 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 NPLQ9BXD5 320 aaPredicted RBP13.4□□□□□ -0.26
VAMP4-203ENST00000474047 ROGDIQ9GZN7 287 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 NOL11Q9H8H0 719 aaKnown RBP13.4□□□□□ -0.26
VAMP4-203ENST00000474047 SLAMF7Q9NQ25 335 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 SCN2AQ99250 2005 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 IGHV3-20A0A0C4DH32 117 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 MAGEB17A8MXT2 336 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 E2F3O00716 465 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 UGDHO60701 494 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 SEC24DO94855 1032 aaPredicted RBP13.39□□□□□ -0.27
VAMP4-203ENST00000474047 CLDN9O95484 217 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 TGFB1P01137 390 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 SHBGP04278 402 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 RAP1GDS1P52306 607 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 MTTPP55157 894 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 OR4D2P58180 307 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 TLE1Q04724 770 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 PCDH1Q08174 1060 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 RCN2Q14257 317 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 CPSF6Q16630 551 aaKnown RBP eCLIP13.39□□□□□ -0.27
VAMP4-203ENST00000474047 AP5B1Q2VPB7 878 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 TMEM35AQ53FP2 167 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 TTC19Q6DKK2 380 aaPredicted RBP13.39□□□□□ -0.27
VAMP4-203ENST00000474047 ANKRD37Q7Z713 158 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 SHISA5Q8N114 240 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 CYP4X1Q8N118 509 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 CA13Q8N1Q1 262 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 PLPP5Q8NEB5 264 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 MAGEB10Q96LZ2 347 aaPredicted RBP13.39□□□□□ -0.27
VAMP4-203ENST00000474047 KCNC2Q96PR1 638 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 SERINC2Q96SA4 455 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 EPS8L2Q9H6S3 715 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 LANCL2Q9NS86 450 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.39□□□□□ -0.27
VAMP4-203ENST00000474047 DCDC2Q9UHG0 476 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 MRPS33Q9Y291 106 aaKnown RBP13.39□□□□□ -0.27
VAMP4-203ENST00000474047 V9GYY5 206 aaPredicted RBP13.39□□□□□ -0.27
VAMP4-203ENST00000474047 FAM227AF5H4B4 570 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 CLDN4O14493 209 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 SERPINA7P05543 415 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 PRR35P0CG20 571 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 VSNL1P62760 191 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 RHAGQ02094 409 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 Q0VFX4 171 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 PCOLCEQ15113 449 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 BTBD16Q32M84 506 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 SFT2D3Q587I9 215 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 ABHD17CQ6PCB6 329 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 ISLR2Q6UXK2 745 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 LINC00696Q6ZRV3 163 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 RIPOR1Q6ZS17 1223 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 HUS1BQ8NHY5 278 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 ZNF473Q8WTR7 871 aaKnown RBP13.39□□□□□ -0.27
VAMP4-203ENST00000474047 MTERF1Q99551 399 aaKnown RBP13.39□□□□□ -0.27
VAMP4-203ENST00000474047 LPAR4Q99677 370 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 TBCDQ9BTW9 1192 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 MS4A8Q9BY19 250 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 AICDAQ9GZX7 198 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 EPN3Q9H201 632 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 SEMA4BQ9NPR2 832 aaPredicted RBP13.39□□□□□ -0.27
VAMP4-203ENST00000474047 TMEM216Q9P0N5 145 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 PTGFRNQ9P2B2 879 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 MAP10Q9P2G4 905 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 RNF11Q9Y3C5 154 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 SPACA6W5XKT8 324 aa13.39□□□□□ -0.27
VAMP4-203ENST00000474047 TLDC2A0PJX2 215 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 C4orf51C9J302 202 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 PYCARD-AS1I3L0S3 204 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 GSTA1P08263 222 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 HSD17B3P37058 310 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 PIK3CBP42338 1070 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 BTG2P78543 158 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 IFFO1Q0D2I5 559 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 RUNX2Q13950 521 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 E2F2Q14209 437 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 ADPRMQ3LIE5 342 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 CRB2Q5IJ48 1285 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 JMJD6Q6NYC1 403 aaPredicted RBP13.38□□□□□ -0.27
VAMP4-203ENST00000474047 SIRT6Q8N6T7 355 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 ADAMTS18Q8TE60 1221 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 TSLPQ969D9 159 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 RGMAQ96B86 450 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 ILKAPQ9H0C8 392 aaPredicted RBP13.38□□□□□ -0.27
VAMP4-203ENST00000474047 OR51B5Q9H339 312 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 PRDM9Q9NQV7 894 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 LUZP4Q9P127 313 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 PCTPQ9UKL6 214 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 ZNF462Q96JM2 2506 aa13.38□□□□□ -0.27
VAMP4-203ENST00000474047 DOCK10Q96BY6 2186 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms