RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 IGKV6D-21A0A0A0MT36 114 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 PVALEFA0A1B0GWK0 134 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 GSTTP1A0A1W2PQM5 241 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 BICDL2A1A5D9 508 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 OR2A25A4D2G3 310 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 DDX39AO00148 427 aaKnown RBP4.71□□□□□ -1.66
CCDC39-202ENST00000471307 CHMP2AO43633 222 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 GGPS1O95749 300 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 CCNE2O96020 404 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 SUPT20HL2P0C7V6 817 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 GJA1P17302 382 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 CTNNA1P35221 906 aaKnown RBP4.71□□□□□ -1.66
CCDC39-202ENST00000471307 SLC26A2P50443 739 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 DMPKQ09013 629 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 CCL14Q16627 93 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 FASTKD1Q53R41 847 aaKnown RBP4.71□□□□□ -1.66
CCDC39-202ENST00000471307 DOK6Q6PKX4 331 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 SASS6Q6UVJ0 657 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 OTUD6AQ7L8S5 288 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 KRT74Q7RTS7 529 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 PLPPR4Q7Z2D5 763 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 P2RY8Q86VZ1 359 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 CEP57Q86XR8 500 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 LACC1Q8IV20 430 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 FBXO16Q8IX29 292 aaPredicted RBP4.71□□□□□ -1.66
CCDC39-202ENST00000471307 KIRREL3Q8IZU9 778 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 SYT2Q8N9I0 419 aaPredicted RBP4.71□□□□□ -1.66
CCDC39-202ENST00000471307 OR10G8Q8NGN5 311 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 PPTC7Q8NI37 304 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 CD99L2Q8TCZ2 262 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 RAET1EQ8TD07 263 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 AFAP1L1Q8TED9 768 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 RAD54LQ92698 747 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 FAM120BQ96EK7 910 aaKnown RBP4.71□□□□□ -1.66
CCDC39-202ENST00000471307 SPATA33Q96N06 139 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 GSDMAQ96QA5 445 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 PLIN2Q99541 437 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 LXNQ9BS40 222 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 AZI2Q9H6S1 392 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 ATP13A3Q9H7F0 1226 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 NRBP2Q9NSY0 501 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 NFKBIL1Q9UBC1 381 aaPredicted RBP4.71□□□□□ -1.66
CCDC39-202ENST00000471307 TUBE1Q9UJT0 475 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 ZHX1Q9UKY1 873 aaPredicted RBP4.71□□□□□ -1.66
CCDC39-202ENST00000471307 MAGED1Q9Y5V3 778 aaPredicted RBP4.71□□□□□ -1.66
CCDC39-202ENST00000471307 LOXHD1Q8IVV2 1947 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 PCNTO95613 3336 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 SYCE3A1L190 88 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 AGAP14A8MT82 685 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 E9PMD0 336 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 P4HA2O15460 535 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 AHCYL1O43865 530 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 OR10H2O60403 315 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 DUSP11O75319 330 aaKnown RBP4.7□□□□□ -1.66
CCDC39-202ENST00000471307 AVILO75366 819 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 CCDC192P0DO97 292 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 GATA1P15976 413 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-202ENST00000471307 UGT1A4P22310 534 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 YWHABP31946 246 aaKnown RBP4.7□□□□□ -1.66
CCDC39-202ENST00000471307 TCF7P36402 384 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-202ENST00000471307 NKX2-1P43699 371 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-202ENST00000471307 SLC9A3P48764 834 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 SLC12A3P55017 1021 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 MAZP56270 477 aaKnown RBP4.7□□□□□ -1.66
CCDC39-202ENST00000471307 PSMC6P62333 389 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 ARHGAP1Q07960 439 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 CHAF1BQ13112 559 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 C15orf59Q2T9L4 293 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-202ENST00000471307 HSDL1Q3SXM5 330 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 XKR3Q5GH77 459 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 SLC30A6Q6NXT4 461 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 TMPRSS11FQ6ZWK6 438 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 LRRTM1Q86UE6 522 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 NUDT13Q86X67 352 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 KBTBD8Q8NFY9 601 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 OR5M8Q8NGP6 311 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 EXD1Q8NHP7 514 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 CCDC47Q96A33 483 aaKnown RBP4.7□□□□□ -1.66
CCDC39-202ENST00000471307 ZMAT2Q96NC0 199 aaKnown RBP4.7□□□□□ -1.66
CCDC39-202ENST00000471307 CENPOQ9BU64 300 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 TIPINQ9BVW5 301 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 NUP85Q9BW27 656 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 TRIM9Q9C026 710 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 WWTR1Q9GZV5 400 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 GHITMQ9H3K2 345 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 ZNF302Q9NR11 478 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 ANO10Q9NW15 660 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 RMND1Q9NWS8 449 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 CACNG4Q9UBN1 327 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 WBP11Q9Y2W2 641 aaKnown RBP4.7□□□□□ -1.66
CCDC39-202ENST00000471307 DOCK5Q9H7D0 1870 aa4.7□□□□□ -1.66
CCDC39-202ENST00000471307 LRRC37A2A6NM11 1700 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 CEP350Q5VT06 3117 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 ARHGEF35A5YM69 484 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 ANKUB1A6NFN9 424 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 ANKRD61A6NGH8 418 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 CTDSP2O14595 271 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 DOK2O60496 412 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 STBD1O95210 358 aa4.69□□□□□ -1.66
CCDC39-202ENST00000471307 OR2T7P0C7T2 308 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms