RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 ARL4CP56559 192 aa19.69■□□□□ 0.74
COL9A3-207ENST00000467819 TAS2R39P59534 338 aa19.69■□□□□ 0.74
COL9A3-207ENST00000467819 BTN3A2P78410 334 aa19.69■□□□□ 0.74
COL9A3-207ENST00000467819 MGAT5Q09328 741 aa19.69■□□□□ 0.74
COL9A3-207ENST00000467819 C18orf21Q32NC0 220 aaPredicted RBP19.69■□□□□ 0.74
COL9A3-207ENST00000467819 FRA10AC1Q70Z53 315 aa19.69■□□□□ 0.74
COL9A3-207ENST00000467819 ZC3HC1Q86WB0 502 aaKnown RBP19.69■□□□□ 0.74
COL9A3-207ENST00000467819 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.69■□□□□ 0.74
COL9A3-207ENST00000467819 CCT6BQ92526 530 aa19.69■□□□□ 0.74
COL9A3-207ENST00000467819 MTFMTQ96DP5 389 aaKnown RBP19.69■□□□□ 0.74
COL9A3-207ENST00000467819 PDLIM2Q96JY6 352 aa19.69■□□□□ 0.74
COL9A3-207ENST00000467819 OARD1Q9Y530 152 aa19.69■□□□□ 0.74
COL9A3-207ENST00000467819 CCDC168Q8NDH2 2452 aa19.68■□□□□ 0.74
COL9A3-207ENST00000467819 MYO1DO94832 1006 aa19.68■□□□□ 0.74
COL9A3-207ENST00000467819 TCP1P17987 556 aaKnown RBP19.68■□□□□ 0.74
COL9A3-207ENST00000467819 RFC3P40938 356 aa19.68■□□□□ 0.74
COL9A3-207ENST00000467819 GDF5P43026 501 aa19.68■□□□□ 0.74
COL9A3-207ENST00000467819 MEOX1P50221 254 aa19.68■□□□□ 0.74
COL9A3-207ENST00000467819 STXBP1P61764 594 aaKnown RBP19.68■□□□□ 0.74
COL9A3-207ENST00000467819 CDKL1Q00532 357 aa19.68■□□□□ 0.74
COL9A3-207ENST00000467819 DR1Q01658 176 aa19.68■□□□□ 0.74
COL9A3-207ENST00000467819 TSNQ15631 228 aaKnown RBP19.68■□□□□ 0.74
COL9A3-207ENST00000467819 SYDE1Q6ZW31 735 aaPredicted RBP19.68■□□□□ 0.74
COL9A3-207ENST00000467819 CHERPQ8IWX8 916 aaKnown RBP19.68■□□□□ 0.74
COL9A3-207ENST00000467819 ANKRD49Q8WVL7 239 aa19.68■□□□□ 0.74
COL9A3-207ENST00000467819 GAL3ST3Q96A11 431 aa19.68■□□□□ 0.74
COL9A3-207ENST00000467819 FAR2Q96K12 515 aa19.68■□□□□ 0.74
COL9A3-207ENST00000467819 LURAP1Q96LR2 239 aa19.68■□□□□ 0.74
COL9A3-207ENST00000467819 TRIM8Q9BZR9 551 aa19.68■□□□□ 0.74
COL9A3-207ENST00000467819 TRIM31Q9BZY9 425 aa19.68■□□□□ 0.74
COL9A3-207ENST00000467819 TRIM45Q9H8W5 580 aaPredicted RBP19.68■□□□□ 0.74
COL9A3-207ENST00000467819 PNO1Q9NRX1 252 aaKnown RBP19.68■□□□□ 0.74
COL9A3-207ENST00000467819 CTNNAL1Q9UBT7 734 aa19.68■□□□□ 0.74
COL9A3-207ENST00000467819 FBXW2Q9UKT8 454 aa19.68■□□□□ 0.74
COL9A3-207ENST00000467819 EML6Q6ZMW3 1958 aa19.68■□□□□ 0.74
COL9A3-207ENST00000467819 ZNF407Q9C0G0 2248 aa19.67■□□□□ 0.74
COL9A3-207ENST00000467819 TFECO14948 347 aaPredicted RBP19.67■□□□□ 0.74
COL9A3-207ENST00000467819 C1GALT1C1LP0DN25 315 aa19.67■□□□□ 0.74
COL9A3-207ENST00000467819 TRHRP34981 398 aaPredicted RBP19.67■□□□□ 0.74
COL9A3-207ENST00000467819 PTGER1P34995 402 aa19.67■□□□□ 0.74
COL9A3-207ENST00000467819 HNMTP50135 292 aa19.67■□□□□ 0.74
COL9A3-207ENST00000467819 CLCN2P51788 898 aa19.67■□□□□ 0.74
COL9A3-207ENST00000467819 PDIA2Q13087 525 aaKnown RBP19.67■□□□□ 0.74
COL9A3-207ENST00000467819 FRG1Q14331 258 aaKnown RBP19.67■□□□□ 0.74
COL9A3-207ENST00000467819 SLBPQ14493 270 aaKnown RBP eCLIP19.67■□□□□ 0.74
COL9A3-207ENST00000467819 FASTKD3Q14CZ7 662 aaKnown RBP19.67■□□□□ 0.74
COL9A3-207ENST00000467819 DOLPP1Q86YN1 238 aa19.67■□□□□ 0.74
COL9A3-207ENST00000467819 APCDD1LQ8NCL9 501 aa19.67■□□□□ 0.74
COL9A3-207ENST00000467819 FBXO36Q8NEA4 188 aa19.67■□□□□ 0.74
COL9A3-207ENST00000467819 B3GNT7Q8NFL0 401 aa19.67■□□□□ 0.74
COL9A3-207ENST00000467819 ANKRD7Q92527 254 aa19.67■□□□□ 0.74
COL9A3-207ENST00000467819 KLF13Q9Y2Y9 288 aaPredicted RBP19.67■□□□□ 0.74
COL9A3-207ENST00000467819 MMACHCQ9Y4U1 282 aa19.67■□□□□ 0.74
COL9A3-207ENST00000467819 ADGRG4Q8IZF6 3080 aa19.66■□□□□ 0.74
COL9A3-207ENST00000467819 DNAJC13O75165 2243 aa19.66■□□□□ 0.74
COL9A3-207ENST00000467819 NCF1BA6NI72 391 aaPredicted RBP19.66■□□□□ 0.74
COL9A3-207ENST00000467819 NCF1CA8MVU1 366 aaPredicted RBP19.66■□□□□ 0.74
COL9A3-207ENST00000467819 PRRG2O14669 202 aa19.66■□□□□ 0.74
COL9A3-207ENST00000467819 ERI3O43414 337 aaKnown RBP19.66■□□□□ 0.74
COL9A3-207ENST00000467819 H2AFYO75367 372 aaKnown RBP19.66■□□□□ 0.74
COL9A3-207ENST00000467819 SEC31AO94979 1220 aaKnown RBP19.66■□□□□ 0.74
COL9A3-207ENST00000467819 NCF1P14598 390 aaPredicted RBP19.66■□□□□ 0.74
COL9A3-207ENST00000467819 GNAZP19086 355 aa19.66■□□□□ 0.74
COL9A3-207ENST00000467819 PPP2R1BP30154 601 aa19.66■□□□□ 0.74
COL9A3-207ENST00000467819 HNRNPH1P31943 449 aaKnown RBP19.66■□□□□ 0.74
COL9A3-207ENST00000467819 RUNX2Q13950 521 aa19.66■□□□□ 0.74
COL9A3-207ENST00000467819 SLCO4C1Q6ZQN7 724 aa19.66■□□□□ 0.74
COL9A3-207ENST00000467819 FGD2Q7Z6J4 655 aa19.66■□□□□ 0.74
COL9A3-207ENST00000467819 ADAMTSL2Q86TH1 951 aa19.66■□□□□ 0.74
COL9A3-207ENST00000467819 CEP97Q8IW35 865 aa19.66■□□□□ 0.74
COL9A3-207ENST00000467819 CYP4Z2PQ8N1L4 340 aa19.66■□□□□ 0.74
COL9A3-207ENST00000467819 TMEM156Q8N614 296 aa19.66■□□□□ 0.74
COL9A3-207ENST00000467819 PRTFDC1Q9NRG1 225 aa19.66■□□□□ 0.74
COL9A3-207ENST00000467819 ASB1Q9Y576 335 aa19.66■□□□□ 0.74
COL9A3-207ENST00000467819 F8P00451 2351 aa19.66■□□□□ 0.74
COL9A3-207ENST00000467819 TGFBR3LH3BV60 316 aa19.65■□□□□ 0.74
COL9A3-207ENST00000467819 CDC40O60508 579 aaKnown RBP eCLIP19.65■□□□□ 0.74
COL9A3-207ENST00000467819 KIR3DL1P43629 444 aa19.65■□□□□ 0.74
COL9A3-207ENST00000467819 SLC6A12P48065 614 aa19.65■□□□□ 0.74
COL9A3-207ENST00000467819 HNRNPFP52597 415 aaKnown RBP19.65■□□□□ 0.74
COL9A3-207ENST00000467819 TMIGD1Q6UXZ0 262 aa19.65■□□□□ 0.74
COL9A3-207ENST00000467819 CAPN12Q6ZSI9 719 aa19.65■□□□□ 0.74
COL9A3-207ENST00000467819 SULF2Q8IWU5 870 aa19.65■□□□□ 0.74
COL9A3-207ENST00000467819 SCUBE1Q8IWY4 988 aa19.65■□□□□ 0.74
COL9A3-207ENST00000467819 KLHDC8AQ8IYD2 350 aa19.65■□□□□ 0.74
COL9A3-207ENST00000467819 ARMC10Q8N2F6 343 aa19.65■□□□□ 0.74
COL9A3-207ENST00000467819 FAM47BQ8NA70 645 aa19.65■□□□□ 0.74
COL9A3-207ENST00000467819 POGLUT1Q8NBL1 392 aa19.65■□□□□ 0.74
COL9A3-207ENST00000467819 TMEM52Q8NDY8 209 aa19.65■□□□□ 0.74
COL9A3-207ENST00000467819 TTLQ8NG68 377 aa19.65■□□□□ 0.74
COL9A3-207ENST00000467819 NCLNQ969V3 563 aa19.65■□□□□ 0.74
COL9A3-207ENST00000467819 RHBDF1Q96CC6 855 aa19.65■□□□□ 0.74
COL9A3-207ENST00000467819 MS4A6EQ96DS6 147 aa19.65■□□□□ 0.74
COL9A3-207ENST00000467819 VPS39Q96JC1 886 aa19.65■□□□□ 0.74
COL9A3-207ENST00000467819 ZNF223Q9UK11 482 aaPredicted RBP19.65■□□□□ 0.74
COL9A3-207ENST00000467819 PPT2Q9UMR5 302 aa19.65■□□□□ 0.74
COL9A3-207ENST00000467819 ANKRD17O75179 2603 aaKnown RBP19.65■□□□□ 0.74
COL9A3-207ENST00000467819 E9PLN8 166 aa19.64■□□□□ 0.73
COL9A3-207ENST00000467819 KLRC4-KLRK1H3BQV0 150 aa19.64■□□□□ 0.73
COL9A3-207ENST00000467819 ADAM10O14672 748 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms