RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 RFTN2Q52LD8 501 aaPredicted RBP10.57□□□□□ -0.72
VCP-204ENST00000466100 SPIN4Q56A73 249 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 TRIM40Q6P9F5 258 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 IGF2-ASQ6U949 168 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 CEACAM20Q6UY09 585 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 SPATA21Q7Z572 469 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 PIGWQ7Z7B1 504 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 ZCCHC7Q8N3Z6 543 aaKnown RBP10.57□□□□□ -0.72
VCP-204ENST00000466100 SRFBP1Q8NEF9 429 aaKnown RBP10.57□□□□□ -0.72
VCP-204ENST00000466100 TUBGCP3Q96CW5 907 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 MVB12AQ96EY5 273 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 GBP5Q96PP8 586 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 TAAR9Q96RI9 348 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 ZPBPQ9BS86 351 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 CCDC28BQ9BUN5 200 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 TMEM120AQ9BXJ8 343 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 SPRY4Q9C004 299 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 B3GNT4Q9C0J1 378 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 NSRP1Q9H0G5 558 aaKnown RBP10.57□□□□□ -0.72
VCP-204ENST00000466100 POLR1BQ9H9Y6 1135 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 TCF7L2Q9NQB0 619 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 NMRK1Q9NWW6 199 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 IRAK4Q9NWZ3 460 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 ASIC5Q9NY37 505 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 ADAM29Q9UKF5 820 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 SRPK3Q9UPE1 567 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 DLGAP4Q9Y2H0 992 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 TMED5Q9Y3A6 229 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 TMEM184BQ9Y519 407 aaPredicted RBP10.57□□□□□ -0.72
VCP-204ENST00000466100 B3GALT1Q9Y5Z6 326 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 LAMA5O15230 3695 aa10.57□□□□□ -0.72
VCP-204ENST00000466100 IGF2RP11717 2491 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 A0A0G2JND7 137 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 A0A1B0GX78 115 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 TMPRSS11DO60235 418 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 DNAJB6O75190 326 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 PEX11AO75192 247 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 DLGAP3O95886 979 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 ONECUT2O95948 504 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 JMJD7P0C870 316 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 HIST1H1TP22492 207 aaPredicted RBP10.56□□□□□ -0.72
VCP-204ENST00000466100 CERS1P27544 350 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 SSR2P43308 183 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 MAPK10P53779 464 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 ARSFP54793 590 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 MTTPP55157 894 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 ERVK-8P63133 956 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 EMX2Q04743 252 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 TGM3Q08188 693 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 ACSM2AQ08AH3 577 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 NDUFA9Q16795 377 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 GALNTL6Q49A17 601 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 DEFB134Q4QY38 66 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 SPDYAQ5MJ70 313 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 DCAF12Q5T6F0 453 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 ACSM2BQ68CK6 577 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 OR4C11Q6IEV9 310 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 MRM1Q6IN84 353 aaKnown RBP10.56□□□□□ -0.72
VCP-204ENST00000466100 NOXRED1Q6NXP6 359 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 TTLL10Q6ZVT0 673 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 NUDT13Q86X67 352 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 TMEM126BQ8IUX1 230 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 SHISA5Q8N114 240 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 ACOT4Q8N9L9 421 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 OR9A4Q8NGU2 314 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.56□□□□□ -0.72
VCP-204ENST00000466100 PROKR1Q8TCW9 393 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 CCT8L2Q96SF2 557 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 ELAC2Q9BQ52 826 aaKnown RBP10.56□□□□□ -0.72
VCP-204ENST00000466100 CENPKQ9BS16 269 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 NDC1Q9BTX1 674 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 FAM107BQ9H098 131 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 RABEP2Q9H5N1 569 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 ZNF385DQ9H6B1 395 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 ACTR5Q9H9F9 607 aaPredicted RBP10.56□□□□□ -0.72
VCP-204ENST00000466100 ASCL3Q9NQ33 180 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 AHSPQ9NZD4 102 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 FOXJ2Q9P0K8 574 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 DHCR7Q9UBM7 475 aaKnown RBP10.56□□□□□ -0.72
VCP-204ENST00000466100 MCM8Q9UJA3 840 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 NAALAD2Q9Y3Q0 740 aa10.56□□□□□ -0.72
VCP-204ENST00000466100 APC2O95996 2303 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 A0A0A6YYC8 382 aaPredicted RBP10.55□□□□□ -0.72
VCP-204ENST00000466100 ZNF860A6NHJ4 632 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 CDRT15L2A8MXV6 281 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 H0YIG0 161 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 I3L1I5 382 aaPredicted RBP10.55□□□□□ -0.72
VCP-204ENST00000466100 PCDH7O60245 1069 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 CPNE3O75131 537 aaKnown RBP10.55□□□□□ -0.72
VCP-204ENST00000466100 SEC22BO75396 215 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 RDH16O75452 317 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 DXOO77932 396 aaKnown RBP10.55□□□□□ -0.72
VCP-204ENST00000466100 KIAA0754O94854 1291 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 FAM107AO95990 144 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 GBAP04062 536 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 NTRK1P04629 796 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 KLK1P06870 262 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 HBQ1P09105 142 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 BCKDHAP12694 445 aa10.55□□□□□ -0.72
VCP-204ENST00000466100 LBPP18428 481 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms