RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	GRAMD2A	Q8IUY3	354 aa		4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	ARID3B	Q8IVW6	561 aa	Predicted RBP	4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	CEP97	Q8IW35	865 aa		4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	RNF113B	Q8IZP6	322 aa	Known RBP	4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	EMC1	Q8N766	993 aa		4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	LINC00301	Q8NCQ3	95 aa		4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	GDAP1	Q8TB36	358 aa		4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	FIG4	Q92562	907 aa		4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	ATP6V0A1	Q93050	837 aa		4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	C16orf45	Q96MC5	204 aa	Predicted RBP	4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	PAFAH2	Q99487	392 aa		4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	LGMN	Q99538	433 aa		4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	CSTL1	Q9H114	145 aa		4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	ZWILCH	Q9H900	591 aa		4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	TMEM165	Q9HC07	324 aa		4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	ZNF224	Q9NZL3	707 aa		4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	SEC63	Q9UGP8	760 aa	Known RBP	4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	LCMT1	Q9UIC8	334 aa		4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	NSD1	Q96L73	2696 aa	Predicted RBP	4.75	□□□□□ -1.65
CACNA1C-223	ENST00000465278	ZFC3H1	O60293	1989 aa	Known RBP	4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	UBE4B	O95155	1302 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	SAA2-SAA4	A0A096LPE2	208 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	ARPC4-TTLL3	A0A0A6YYG9	625 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	MAGEA13P	A6NCF6	341 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	LRRC72	A6NJI9	287 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	CDRT15L2	A8MXV6	281 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278		J3QR06	171 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	PLOD2	O00469	737 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	ADAMDEC1	O15204	470 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	MITF	O75030	526 aa	Predicted RBP	4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	RSL1D1	O76021	490 aa	Known RBP	4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	PLEKHA8P1	O95397	391 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	EZR	P15311	586 aa	Known RBP	4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	SAT1	P21673	171 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	HRH2	P25021	359 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	TKT	P29401	623 aa	Known RBP	4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	HSD17B2	P37059	387 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	ART1	P52961	327 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	B2M	P61769	119 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	ROR1	Q01973	937 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	SNTA1	Q13424	505 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	IZUMO4	Q1ZYL8	232 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	ZNF324B	Q6AW86	544 aa	Predicted RBP	4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	LCN10	Q6JVE6	187 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	NEPRO	Q6NW34	567 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	PAPD4	Q6PIY7	484 aa	Known RBP	4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	PPP1R21	Q6ZMI0	780 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	TMEM179	Q6ZVK1	233 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	RAPH1	Q70E73	1250 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	NANOGNB	Q7Z5D8	188 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	SERINC5	Q86VE9	423 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	TMPRSS12	Q86WS5	348 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	LINC00346	Q8IVM7	164 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	NAXD	Q8IW45	347 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	HACE1	Q8IYU2	909 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	SLC34A3	Q8N130	599 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	SCML4	Q8N228	414 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	ZNF713	Q8N859	430 aa	Predicted RBP	4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	ZNF441	Q8N8Z8	693 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	IL17RC	Q8NAC3	791 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	C9orf106	Q8NAJ2	232 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	GMCL1P1	Q8NEA9	526 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	CCDC148	Q8NFR7	591 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	OR8H1	Q8NGG4	311 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	PIGT	Q969N2	578 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	GIMAP5	Q96F15	307 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	QRFPR	Q96P65	431 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	RBM14	Q96PK6	669 aa	Known RBP	4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	USP28	Q96RU2	1077 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	DDO	Q99489	341 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	CCT7	Q99832	543 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	FUCA2	Q9BTY2	467 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	C1QTNF4	Q9BXJ3	329 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	ZMYND12	Q9H0C1	365 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	RAD21L1	Q9H4I0	556 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	MAGIX	Q9H6Y5	334 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	UBTD1	Q9HAC8	227 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	PARVB	Q9HBI1	364 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	TMEM30A	Q9NV96	361 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	UBA2	Q9UBT2	640 aa	Predicted RBP	4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	FBXL5	Q9UKA1	691 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	PLAGL1	Q9UM63	463 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	ZNF711	Q9Y462	761 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	RIPK3	Q9Y572	518 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	MEGF8	Q7Z7M0	2845 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	TP53BP1	Q12888	1972 aa	Predicted RBP	4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	TACC2	O95359	2948 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	PCLO	Q9Y6V0	5065 aa		4.74	□□□□□ -1.65
CACNA1C-223	ENST00000465278	ZNF106	Q9H2Y7	1883 aa	Known RBP	4.73	□□□□□ -1.65
CACNA1C-223	ENST00000465278		A0A1W2PR77	199 aa		4.73	□□□□□ -1.65
CACNA1C-223	ENST00000465278	EME2	A4GXA9	379 aa	Predicted RBP	4.73	□□□□□ -1.65
CACNA1C-223	ENST00000465278	TMEM189-UBE2V1	I3L0A0	370 aa		4.73	□□□□□ -1.65
CACNA1C-223	ENST00000465278	EDIL3	O43854	480 aa		4.73	□□□□□ -1.65
CACNA1C-223	ENST00000465278	ZNF217	O75362	1048 aa		4.73	□□□□□ -1.65
CACNA1C-223	ENST00000465278	ZWINT	O95229	277 aa		4.73	□□□□□ -1.65
CACNA1C-223	ENST00000465278	NADK	O95544	446 aa	Predicted RBP	4.73	□□□□□ -1.65
CACNA1C-223	ENST00000465278	APBB3	O95704	486 aa		4.73	□□□□□ -1.65
CACNA1C-223	ENST00000465278	PAH	P00439	452 aa		4.73	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms