RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 MS4A4AQ96JQ5 239 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 F2RL3Q96RI0 385 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 CCM2Q9BSQ5 444 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 IFT27Q9BW83 186 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 ARNT2Q9HBZ2 717 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 TRPS1Q9UHF7 1281 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 SHROOM3Q8TF72 1996 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 SBF2Q86WG5 1849 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 A0A1B0GTL3 188 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 LOC285095A0A1B0GVY8 99 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 A0A1W2PPK0 400 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 FAM92AA1XBS5 289 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 H0YJX3 145 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 KLHL18O94889 574 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 PAK4O96013 591 aaPredicted RBP8.74□□□□□ -1.01
HPS4-208ENST00000464362 NUDT7P0C024 238 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 PFKLP17858 780 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 RELAQ04206 551 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 HNRNPA0Q13151 305 aaKnown RBP8.74□□□□□ -1.01
HPS4-208ENST00000464362 E2F2Q14209 437 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 LRRC32Q14392 662 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 TRIM71Q2Q1W2 868 aaKnown RBP8.74□□□□□ -1.01
HPS4-208ENST00000464362 TPGS2Q68CL5 300 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 ZNF544Q6NX49 715 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 FAM180AQ6UWF9 173 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 CARM1Q86X55 608 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 GALNT13Q8IUC8 556 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 CCDC116Q8IYX3 515 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 POMGNT2Q8NAT1 580 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 DNAJB8Q8NHS0 232 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 GPR151Q8TDV0 419 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 SNX33Q8WV41 574 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 UBE2FQ969M7 185 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 RNF31Q96EP0 1072 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 BIRC8Q96P09 236 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 GPR78Q96P69 363 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 SGIP1Q9BQI5 828 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 SLC30A2Q9BRI3 323 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 SLITRK2Q9H156 845 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.74□□□□□ -1.01
HPS4-208ENST00000464362 PCDH10Q9P2E7 1040 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 DPP7Q9UHL4 492 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 UTS2RQ9UKP6 389 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 NCKAP1Q9Y2A7 1128 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 KIAA1551Q9HCM1 1747 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 UTRNP46939 3433 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 DOCK2Q92608 1830 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 A0A075B6Q4 140 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 ARHGEF33A8MVX0 844 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 PITPNM1O00562 1244 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 DYRK3O43781 588 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 KIAA0513O60268 411 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 SDC1P18827 310 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 PRR5P85299 388 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 PPP2R2BQ00005 443 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 GINS1Q14691 196 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 SPCS2Q15005 226 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 LARS2Q15031 903 aaKnown RBP8.74□□□□□ -1.01
HPS4-208ENST00000464362 NCEH1Q6PIU2 408 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 TBPL2Q6SJ96 375 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 NUDT13Q86X67 352 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 PEX5LQ8IYB4 626 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 IQCF1Q8N6M8 205 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 GRHL3Q8TE85 626 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 TRUB1Q8WWH5 349 aaKnown RBP8.74□□□□□ -1.01
HPS4-208ENST00000464362 UFD1Q92890 307 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 ZSCAN5AQ9BUG6 496 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 TSSK6Q9BXA6 273 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 C1QTNF7Q9BXJ2 289 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 ACPTQ9BZG2 426 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 ING4Q9UNL4 249 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 ABCG2Q9UNQ0 655 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 TMED5Q9Y3A6 229 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 SCN1AP35498 2009 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 TTC34A8MYJ7 566 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 GTPBP1O00178 669 aaKnown RBP8.74□□□□□ -1.01
HPS4-208ENST00000464362 NDUFS4O43181 175 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 B3GALT4O96024 378 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 SLC2A2P11168 524 aaPredicted RBP8.74□□□□□ -1.01
HPS4-208ENST00000464362 HTR1BP28222 390 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 SLC3A1Q07837 685 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 GRIK2Q13002 908 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 CATSPEREQ5SY80 951 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 NADSYN1Q6IA69 706 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 BRAT1Q6PJG6 821 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 CRTC1Q6UUV9 634 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 TMEM151AQ8N4L1 468 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 SLC5A11Q8WWX8 675 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 PIK3R3Q92569 461 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 SGCDQ92629 289 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 GTF2H4Q92759 462 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 PHOX2BQ99453 314 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 MED28Q9H204 178 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 ZBTB20Q9HC78 741 aaPredicted RBP8.74□□□□□ -1.01
HPS4-208ENST00000464362 FAIMQ9NVQ4 179 aa8.74□□□□□ -1.01
HPS4-208ENST00000464362 DAPL1A0PJW8 107 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 FEZF1A0PJY2 475 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 FAM170BA6NMN3 283 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 MPZL2O60487 215 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 OR12D1P0DN82 309 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms