RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 MTFR2Q6P444 385 aa12.65□□□□□ -0.38
COMMD3-205ENST00000463688 PAPD4Q6PIY7 484 aaKnown RBP12.65□□□□□ -0.38
COMMD3-205ENST00000463688 TRMT10CQ7L0Y3 403 aaKnown RBP12.65□□□□□ -0.38
COMMD3-205ENST00000463688 CUZD1Q86UP6 607 aa12.65□□□□□ -0.38
COMMD3-205ENST00000463688 C17orf53Q8N3J3 647 aaPredicted RBP12.65□□□□□ -0.38
COMMD3-205ENST00000463688 TMEM132CQ8N3T6 1108 aa12.65□□□□□ -0.38
COMMD3-205ENST00000463688 TMEM178AQ8NBL3 297 aa12.65□□□□□ -0.38
COMMD3-205ENST00000463688 CREB3L4Q8TEY5 395 aa12.65□□□□□ -0.38
COMMD3-205ENST00000463688 CMTM7Q96FZ5 175 aa12.65□□□□□ -0.38
COMMD3-205ENST00000463688 SMIM10Q96HG1 83 aa12.65□□□□□ -0.38
COMMD3-205ENST00000463688 BARD1Q99728 777 aaKnown RBP12.65□□□□□ -0.38
COMMD3-205ENST00000463688 LYRM4Q9HD34 91 aa12.65□□□□□ -0.38
COMMD3-205ENST00000463688 PSD3Q9NYI0 1048 aa12.65□□□□□ -0.38
COMMD3-205ENST00000463688 SH2B3Q9UQQ2 575 aa12.65□□□□□ -0.38
COMMD3-205ENST00000463688 TSC22D4Q9Y3Q8 395 aa12.65□□□□□ -0.38
COMMD3-205ENST00000463688 MED13Q9UHV7 2174 aa12.65□□□□□ -0.39
COMMD3-205ENST00000463688 HEATR5BQ9P2D3 2071 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 CLEC18AA5D8T8 446 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 PRAMEF2O60811 474 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 B4GALT2O60909 372 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 SMIM24O75264 130 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 RASAL1O95294 804 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 C2P06681 752 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 PIK3CBP42338 1070 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 GDF5P43026 501 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 CASP6P55212 293 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 RAB8AP61006 207 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 Q0VFX4 171 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 CHIT1Q13231 466 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 ZXDCQ2QGD7 858 aaPredicted RBP12.64□□□□□ -0.39
COMMD3-205ENST00000463688 AP5B1Q2VPB7 878 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 H3F3CQ6NXT2 135 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 CLEC18BQ6UXF7 455 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 PDSS2Q86YH6 399 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 DTWD1Q8N5C7 304 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 EIF1ADQ8N9N8 165 aaKnown RBP12.64□□□□□ -0.39
COMMD3-205ENST00000463688 ANKRD53Q8N9V6 530 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 CLEC18CQ8NCF0 446 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 SLC44A1Q8WWI5 657 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 DAZLQ92904 295 aaKnown RBP12.64□□□□□ -0.39
COMMD3-205ENST00000463688 TMEM125Q96AQ2 219 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 C5orf34Q96MH7 638 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 MACROD1Q9BQ69 325 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 PPCSQ9HAB8 311 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 OLAHQ9NV23 265 aa12.64□□□□□ -0.39
COMMD3-205ENST00000463688 A0A1B0GUH1 482 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 TCP11X1B4DZS4 312 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 SEC24DO94855 1032 aaPredicted RBP12.63□□□□□ -0.39
COMMD3-205ENST00000463688 CBX6O95503 412 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 COX7A2P14406 83 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 GNLYP22749 145 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 PTX3P26022 381 aaPredicted RBP12.63□□□□□ -0.39
COMMD3-205ENST00000463688 CLCN2P51788 898 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 RAB38P57729 211 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 FOXL2P58012 376 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 DOC2AQ14183 400 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 E2F2Q14209 437 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 NAA30Q147X3 362 aaPredicted RBP12.63□□□□□ -0.39
COMMD3-205ENST00000463688 OR4D1Q15615 310 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 ADPRMQ3LIE5 342 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 PRSS41Q7RTY9 318 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.63□□□□□ -0.39
COMMD3-205ENST00000463688 CYP4X1Q8N118 509 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 EID3Q8N140 333 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 SPATA6LQ8N4H0 392 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 SIRT6Q8N6T7 355 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 SSC4DQ8WTU2 575 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.63□□□□□ -0.39
COMMD3-205ENST00000463688 PSMF1Q92530 271 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 MS4A6EQ96DS6 147 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 ATOH8Q96SQ7 321 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 DEFB126Q9BYW3 111 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 ACTR8Q9H981 624 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 SNX15Q9NRS6 342 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 LANCL2Q9NS86 450 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 ASF1BQ9NVP2 202 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 NMRK1Q9NWW6 199 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 AHSPQ9NZD4 102 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 IKZF3Q9UKT9 509 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 SLC5A6Q9Y289 635 aa12.63□□□□□ -0.39
COMMD3-205ENST00000463688 PRRC2CQ9Y520 2896 aaKnown RBP12.63□□□□□ -0.39
COMMD3-205ENST00000463688 TCRBV16S1A1N1A0A5B0 115 aa12.62□□□□□ -0.39
COMMD3-205ENST00000463688 ESYT3A0FGR9 886 aa12.62□□□□□ -0.39
COMMD3-205ENST00000463688 ZNF860A6NHJ4 632 aa12.62□□□□□ -0.39
COMMD3-205ENST00000463688 SAGE2PA6NJ88 616 aa12.62□□□□□ -0.39
COMMD3-205ENST00000463688 PYCARD-AS1I3L0S3 204 aa12.62□□□□□ -0.39
COMMD3-205ENST00000463688 FFAR3O14843 346 aa12.62□□□□□ -0.39
COMMD3-205ENST00000463688 GPR42O15529 346 aa12.62□□□□□ -0.39
COMMD3-205ENST00000463688 TAPBPO15533 448 aa12.62□□□□□ -0.39
COMMD3-205ENST00000463688 CDC123O75794 336 aaPredicted RBP12.62□□□□□ -0.39
COMMD3-205ENST00000463688 C1QAP02745 245 aa12.62□□□□□ -0.39
COMMD3-205ENST00000463688 STATHP02808 62 aa12.62□□□□□ -0.39
COMMD3-205ENST00000463688 ABHD2P08910 425 aa12.62□□□□□ -0.39
COMMD3-205ENST00000463688 SNRPAP09012 282 aaKnown RBP12.62□□□□□ -0.39
COMMD3-205ENST00000463688 ITGAMP11215 1152 aa12.62□□□□□ -0.39
COMMD3-205ENST00000463688 RAP1GDS1P52306 607 aa12.62□□□□□ -0.39
COMMD3-205ENST00000463688 SLC26A5P58743 744 aa12.62□□□□□ -0.39
COMMD3-205ENST00000463688 NAA20P61599 178 aa12.62□□□□□ -0.39
COMMD3-205ENST00000463688 STX4Q12846 297 aa12.62□□□□□ -0.39
COMMD3-205ENST00000463688 SLC13A2Q13183 592 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms