RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 WDR1O75083 606 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 ZFAND5O76080 213 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 IGHG3P01860 377 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 NPPBP16860 134 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 UQCRC1P31930 480 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 CDK16Q00536 496 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 THOC5Q13769 683 aaKnown RBP13.46□□□□□ -0.25
SMC1A-204ENST00000463684 TERF2Q15554 542 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 SKOR2Q2VWA4 1001 aaPredicted RBP13.46□□□□□ -0.25
SMC1A-204ENST00000463684 WLSQ5T9L3 541 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 HECTD2Q5U5R9 776 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 FBXW10Q5XX13 1052 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 ZNF470Q6ECI4 717 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 RTL6Q6ICC9 239 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 LRRC8EQ6NSJ5 796 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 CASC4Q6P4E1 433 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 IL20RBQ6UXL0 311 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 GK5Q6ZS86 529 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 GSTA5Q7RTV2 222 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 CPNE9Q8IYJ1 553 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 VMP1Q96GC9 406 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 C18orf12Q96KH6 178 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 GPR21Q99679 349 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 TTTY12Q9BZ98 90 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 PNO1Q9NRX1 252 aaKnown RBP13.46□□□□□ -0.25
SMC1A-204ENST00000463684 ALKBH4Q9NXW9 302 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 SAMD15Q9P1V8 674 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 B4GALT7Q9UBV7 327 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 PDE10AQ9Y233 779 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 REXO2Q9Y3B8 237 aaKnown RBP13.46□□□□□ -0.25
SMC1A-204ENST00000463684 FAM215AQ9Y5M1 114 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 COMMD10Q9Y6G5 202 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 SCN3AQ9NY46 2000 aa13.46□□□□□ -0.26
SMC1A-204ENST00000463684 A0A1B0GVC2 190 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 TRBC2A0A5B9 178 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 EIF3FO00303 357 aaPredicted RBP13.45□□□□□ -0.26
SMC1A-204ENST00000463684 SYT5O00445 386 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 AVILO75366 819 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 OR2J2O76002 312 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 RAF1P04049 648 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 C8GP07360 202 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 HIST1H2AGP0C0S8 130 aaPredicted RBP13.45□□□□□ -0.26
SMC1A-204ENST00000463684 HIST1H2ADP20671 130 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 CNR1P21554 472 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 ADH7P40394 386 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 MAN2A2P49641 1150 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 SARNPP82979 210 aaKnown RBP13.45□□□□□ -0.26
SMC1A-204ENST00000463684 CTBP1Q13363 440 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 KEAP1Q14145 624 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 DEFB113Q30KQ7 82 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 C1orf185Q5T7R7 199 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 ZNF549Q6P9A3 640 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 TRILQ7L0X0 811 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 STRA8Q7Z7C7 330 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 SLC13A5Q86YT5 568 aaPredicted RBP13.45□□□□□ -0.26
SMC1A-204ENST00000463684 SPNS2Q8IVW8 549 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 RNF214Q8ND24 703 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 ABHD11Q8NFV4 315 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 OR4K1Q8NGD4 311 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 NT5CQ8TCD5 201 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 CD200R1Q8TD46 325 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 UTP15Q8TED0 518 aaKnown RBP13.45□□□□□ -0.26
SMC1A-204ENST00000463684 FAM222BQ8WU58 562 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 NCLNQ969V3 563 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 SARAFQ96BY9 339 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 HIST1H2AHQ96KK5 128 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 HIST1H2AJQ99878 128 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 SMR3AQ99954 134 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 FAM173AQ9BQD7 235 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 H2AFJQ9BTM1 129 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 SGPP1Q9BX95 441 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 TRIM5Q9C035 493 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 LDAHQ9H6V9 325 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 PARVBQ9HBI1 364 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 FBXO6Q9NRD1 293 aaPredicted RBP13.45□□□□□ -0.26
SMC1A-204ENST00000463684 ZFP69BQ9UJL9 534 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 ADAMTS6Q9UKP5 1117 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 MED16Q9Y2X0 877 aa13.45□□□□□ -0.26
SMC1A-204ENST00000463684 PABPN1LA6NDY0 278 aaKnown RBP13.44□□□□□ -0.26
SMC1A-204ENST00000463684 AQP7O14520 342 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 SUSD5O60279 629 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 GLSO94925 669 aaPredicted RBP13.44□□□□□ -0.26
SMC1A-204ENST00000463684 INHBBP09529 407 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 GABRA1P14867 456 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 HNF4AP41235 474 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 MAGEA5P43359 124 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 RGS4P49798 205 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 RAB8AP61006 207 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 KIF5AQ12840 1032 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 DHX34Q14147 1143 aaKnown RBP13.44□□□□□ -0.26
SMC1A-204ENST00000463684 SLC10A1Q14973 349 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 FLYWCH1Q4VC44 716 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 RIPPLY2Q5TAB7 128 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 ARMC3Q5W041 872 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 UGT3A1Q6NUS8 523 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 PAMR1Q6UXH9 720 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 CLEC9AQ6UXN8 241 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 MBOAT1Q6ZNC8 495 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 DENND6AQ8IWF6 608 aa13.44□□□□□ -0.26
SMC1A-204ENST00000463684 TXLNBQ8N3L3 684 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms