RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 NXPE4Q6UWF7 544 aa13.89□□□□□ -0.19
NCK1-202ENST00000460960 LRIG3Q6UXM1 1119 aa13.89□□□□□ -0.19
NCK1-202ENST00000460960 GOLGA7Q7Z5G4 137 aa13.89□□□□□ -0.19
NCK1-202ENST00000460960 MRGPRGQ86SM5 289 aa13.89□□□□□ -0.19
NCK1-202ENST00000460960 SHISA5Q8N114 240 aa13.89□□□□□ -0.19
NCK1-202ENST00000460960 TEX9Q8N6V9 391 aa13.89□□□□□ -0.19
NCK1-202ENST00000460960 TTC29Q8NA56 475 aaPredicted RBP13.89□□□□□ -0.19
NCK1-202ENST00000460960 OR11G2Q8NGC1 345 aa13.89□□□□□ -0.19
NCK1-202ENST00000460960 NACC2Q96BF6 587 aa13.89□□□□□ -0.19
NCK1-202ENST00000460960 SELENOSQ9BQE4 189 aa13.89□□□□□ -0.19
NCK1-202ENST00000460960 CRB3Q9BUF7 120 aa13.89□□□□□ -0.19
NCK1-202ENST00000460960 CENPHQ9H3R5 247 aa13.89□□□□□ -0.19
NCK1-202ENST00000460960 WDR54Q9H977 334 aa13.89□□□□□ -0.19
NCK1-202ENST00000460960 ZNF160Q9HCG1 818 aa13.89□□□□□ -0.19
NCK1-202ENST00000460960 CUTCQ9NTM9 273 aa13.89□□□□□ -0.19
NCK1-202ENST00000460960 PLA2G3Q9NZ20 509 aa13.89□□□□□ -0.19
NCK1-202ENST00000460960 PTGFRNQ9P2B2 879 aa13.89□□□□□ -0.19
NCK1-202ENST00000460960 MRPS2Q9Y399 296 aaKnown RBP13.89□□□□□ -0.19
NCK1-202ENST00000460960 DYRK1BQ9Y463 629 aa13.89□□□□□ -0.19
NCK1-202ENST00000460960 SCN3AQ9NY46 2000 aa13.89□□□□□ -0.19
NCK1-202ENST00000460960 K7EPI3 171 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 CCL21O00585 134 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 PPP6CO00743 305 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 COPEO14579 308 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 RGS16O15492 202 aaPredicted RBP13.88□□□□□ -0.19
NCK1-202ENST00000460960 F10P00742 488 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 ALBP02768 609 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 ACPPP15309 386 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 EZRP15311 586 aaKnown RBP13.88□□□□□ -0.19
NCK1-202ENST00000460960 TSPAN8P19075 237 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 PTGER4P35408 488 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 CCR8P51685 355 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 SRSF11Q05519 484 aaKnown RBP13.88□□□□□ -0.19
NCK1-202ENST00000460960 Q0VFX4 171 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 DOC2AQ14183 400 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 PCBP2Q15366 365 aaKnown RBP eCLIP13.88□□□□□ -0.19
NCK1-202ENST00000460960 VWA2Q5GFL6 755 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 WASHC2DQ5SRD0 308 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 COX15Q7KZN9 410 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 LRRC70Q7Z2Q7 622 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 EXOC3L1Q86VI1 746 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 ARHGEF39Q8N4T4 335 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 ANKRD53Q8N9V6 530 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 NR4A3Q92570 626 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 RELTQ969Z4 430 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 CCDC120Q96HB5 630 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 APOPT1Q96IL0 206 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 C10orf90Q96M02 699 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 TMEM237Q96Q45 408 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 MESP1Q9BRJ9 268 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 AICDAQ9GZX7 198 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.88□□□□□ -0.19
NCK1-202ENST00000460960 CNOT10Q9H9A5 744 aaKnown RBP13.88□□□□□ -0.19
NCK1-202ENST00000460960 ZBTB26Q9HCK0 441 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 SEMA3GQ9NS98 782 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 OPTCQ9UBM4 332 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 DCDC2Q9UHG0 476 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 NXT1Q9UKK6 140 aaKnown RBP13.88□□□□□ -0.19
NCK1-202ENST00000460960 PCTPQ9UKL6 214 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 KLF2Q9Y5W3 355 aaPredicted RBP13.88□□□□□ -0.19
NCK1-202ENST00000460960 KCNE2Q9Y6J6 123 aa13.88□□□□□ -0.19
NCK1-202ENST00000460960 OR7A17O14581 309 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 PCDH17O14917 1159 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 OR1F1O43749 312 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 SMIM24O75264 130 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 UNC5CO95185 931 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 RPS17P08708 135 aaKnown RBP13.87□□□□□ -0.19
NCK1-202ENST00000460960 C1GALT1C1LP0DN25 315 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 MPP2Q14168 576 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 SLBPQ14493 270 aaKnown RBP eCLIP13.87□□□□□ -0.19
NCK1-202ENST00000460960 GRM7Q14831 915 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 PRTGQ2VWP7 1150 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 UNC50Q53HI1 259 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 ZC3H12BQ5HYM0 836 aaKnown RBP13.87□□□□□ -0.19
NCK1-202ENST00000460960 ATG9BQ674R7 924 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 VN1R5Q7Z5H4 357 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 LCA5Q86VQ0 697 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 SIRT6Q8N6T7 355 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 CSNK1A1LQ8N752 337 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 OR52B6Q8NGF0 335 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 C8orf44Q96CB5 159 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 LMF1Q96S06 567 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 PELI2Q9HAT8 420 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 CHST11Q9NPF2 352 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 MKS1Q9NXB0 559 aa13.87□□□□□ -0.19
NCK1-202ENST00000460960 ZNF490Q9ULM2 529 aaPredicted RBP13.87□□□□□ -0.19
NCK1-202ENST00000460960 RUVBL1Q9Y265 456 aaKnown RBP13.87□□□□□ -0.19
NCK1-202ENST00000460960 TRAV17A0A0B4J275 112 aa13.86□□□□□ -0.19
NCK1-202ENST00000460960 TRBC2A0A5B9 178 aa13.86□□□□□ -0.19
NCK1-202ENST00000460960 FITM1A5D6W6 292 aa13.86□□□□□ -0.19
NCK1-202ENST00000460960 STX16-NPEPL1H3BU86 382 aa13.86□□□□□ -0.19
NCK1-202ENST00000460960 STX16O14662 325 aa13.86□□□□□ -0.19
NCK1-202ENST00000460960 TYROBPO43914 113 aa13.86□□□□□ -0.19
NCK1-202ENST00000460960 SASH3O75995 380 aa13.86□□□□□ -0.19
NCK1-202ENST00000460960 B3GALT4O96024 378 aa13.86□□□□□ -0.19
NCK1-202ENST00000460960 HPP00738 406 aa13.86□□□□□ -0.19
NCK1-202ENST00000460960 GNAZP19086 355 aa13.86□□□□□ -0.19
NCK1-202ENST00000460960 ATP5F1P24539 256 aaPredicted RBP13.86□□□□□ -0.19
NCK1-202ENST00000460960 SCTRP47872 440 aa13.86□□□□□ -0.19
NCK1-202ENST00000460960 TDGF1P3P51864 188 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms