RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 UBFD1O14562 309 aaKnown RBP10.28□□□□□ -0.76
CCDC12-204ENST00000460035 BIRC5O15392 142 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 CHST10O43529 356 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 DNAJB6O75190 326 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 ULK1O75385 1050 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 PDYNP01213 254 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 KRT6AP02538 564 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 KRT6BP04259 564 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 ZGLP1P0C6A0 271 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 SMIM10L1P0DMW3 83 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 ZNF10P21506 573 aaPredicted RBP10.28□□□□□ -0.76
CCDC12-204ENST00000460035 SERPINB3P29508 390 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 OTX2P32243 289 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 KRT6CP48668 564 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 FOXL2P58012 376 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 VAC14Q08AM6 782 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 NKG7Q16617 165 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 AP5B1Q2VPB7 878 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 TMEM35AQ53FP2 167 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 DEPDC1Q5TB30 811 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 MFSD4BQ5TF39 518 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 KHDRBS2Q5VWX1 349 aaKnown RBP10.28□□□□□ -0.76
CCDC12-204ENST00000460035 FAM219BQ5XKK7 198 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 MRPL14Q6P1L8 145 aaKnown RBP10.28□□□□□ -0.76
CCDC12-204ENST00000460035 ABHD17CQ6PCB6 329 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 OR2L5Q8NG80 312 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 OR5T3Q8NGG3 340 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 OR51Q1Q8NH59 317 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 WDR20Q8TBZ3 569 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 STT3BQ8TCJ2 826 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 AGAP11Q8TF27 550 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 RGMAQ96B86 450 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 PEX11GQ96HA9 241 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 SMIM10Q96HG1 83 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 KCNA7Q96RP8 456 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 TBCDQ9BTW9 1192 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 TRMOQ9BU70 441 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 SLC26A1Q9H2B4 701 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 WDR54Q9H977 334 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 COPS7BQ9H9Q2 264 aaPredicted RBP10.28□□□□□ -0.76
CCDC12-204ENST00000460035 EML4Q9HC35 981 aaKnown RBP10.28□□□□□ -0.76
CCDC12-204ENST00000460035 MKKSQ9NPJ1 570 aaPredicted RBP10.28□□□□□ -0.76
CCDC12-204ENST00000460035 DMRT3Q9NQL9 472 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 FARSBQ9NSD9 589 aaKnown RBP10.28□□□□□ -0.76
CCDC12-204ENST00000460035 PSD3Q9NYI0 1048 aa10.28□□□□□ -0.76
CCDC12-204ENST00000460035 VSTM2BA6NLU5 285 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 C4orf51C9J302 202 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 K7ENP7 123 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 PSMD12O00232 456 aaPredicted RBP10.27□□□□□ -0.77
CCDC12-204ENST00000460035 RTCAO00442 366 aaKnown RBP10.27□□□□□ -0.77
CCDC12-204ENST00000460035 B3GALT2O43825 422 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 NPHS1O60500 1241 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 CNOT3O75175 753 aaKnown RBP10.27□□□□□ -0.77
CCDC12-204ENST00000460035 KLF7O75840 302 aaPredicted RBP10.27□□□□□ -0.77
CCDC12-204ENST00000460035 SASH3O75995 380 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 RECKO95980 971 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 HEXBP07686 556 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 XCR1P46094 333 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 ARFIP1P53367 373 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 EMP2P54851 167 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 MTTPP55157 894 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 SSPNQ14714 243 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 CHI3L2Q15782 390 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 COL28A1Q2UY09 1125 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 CRTC2Q53ET0 693 aaPredicted RBP10.27□□□□□ -0.77
CCDC12-204ENST00000460035 TTMPQ5BVD1 217 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 ARL13AQ5H913 290 aaPredicted RBP10.27□□□□□ -0.77
CCDC12-204ENST00000460035 TCHHL1Q5QJ38 904 aaPredicted RBP10.27□□□□□ -0.77
CCDC12-204ENST00000460035 ATP1A1-AS1Q5TC04 95 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 INO80CQ6PI98 192 aaPredicted RBP10.27□□□□□ -0.77
CCDC12-204ENST00000460035 SCIMPQ6UWF3 145 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 UBE3DQ7Z6J8 389 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 CUZD1Q86UP6 607 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 LAPTM4BQ86VI4 370 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 OR2Y1Q8NGV0 311 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 OR6Y1Q8NGX8 325 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 SNRNP27Q8WVK2 155 aaKnown RBP10.27□□□□□ -0.77
CCDC12-204ENST00000460035 CRELD1Q96HD1 420 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 QRFPRQ96P65 431 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 KCNC2Q96PR1 638 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 SERINC2Q96SA4 455 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 HBEGFQ99075 208 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 SERPINI1Q99574 410 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 SORBS1Q9BX66 1292 aaKnown RBP10.27□□□□□ -0.77
CCDC12-204ENST00000460035 SLC29A3Q9BZD2 475 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 ROGDIQ9GZN7 287 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 CLK4Q9HAZ1 481 aaKnown RBP10.27□□□□□ -0.77
CCDC12-204ENST00000460035 PRDM7Q9NQW5 492 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 ZNF446Q9NWS9 450 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 NMRK1Q9NWW6 199 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 AHSPQ9NZD4 102 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 NXT1Q9UKK6 140 aaKnown RBP10.27□□□□□ -0.77
CCDC12-204ENST00000460035 SLC12A4Q9UP95 1085 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 FIS1Q9Y3D6 152 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 ZZEF1O43149 2961 aa10.27□□□□□ -0.77
CCDC12-204ENST00000460035 NUP214P35658 2090 aaPredicted RBP10.27□□□□□ -0.77
CCDC12-204ENST00000460035 PCSK5Q92824 1860 aa10.26□□□□□ -0.77
CCDC12-204ENST00000460035 HMGB1P1B2RPK0 211 aaPredicted RBP10.26□□□□□ -0.77
CCDC12-204ENST00000460035 AZIN1O14977 448 aa10.26□□□□□ -0.77
CCDC12-204ENST00000460035 B4GALT2O60909 372 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms