RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 FKBP14Q9NWM8 211 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 C14orf119Q9NWQ9 140 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 RAB23Q9ULC3 237 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 TAF4O00268 1085 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 EIF3FO00303 357 aaPredicted RBP13.55□□□□□ -0.24
SCFD1-203ENST00000458591 TGM5O43548 720 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 RECKO95980 971 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 S100A1P23297 94 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 SOAT1P35610 550 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 TGM4P49221 684 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 PRIM2P49643 509 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 RGS6P49758 472 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 C2orf80Q0P641 193 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 STARD3Q14849 445 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 PTGES3Q15185 160 aaKnown RBP13.55□□□□□ -0.24
SCFD1-203ENST00000458591 TBCEQ15813 527 aaPredicted RBP13.55□□□□□ -0.24
SCFD1-203ENST00000458591 DUSP7Q16829 419 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 IFI44LQ53G44 452 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 ATAD3BQ5T9A4 648 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 TMEM220Q6QAJ8 160 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 SLCO4C1Q6ZQN7 724 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 COMMD6Q7Z4G1 85 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 TMC8Q8IU68 726 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 SLC44A2Q8IWA5 706 aaPredicted RBP13.55□□□□□ -0.24
SCFD1-203ENST00000458591 SLC39A11Q8N1S5 342 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 METTL4Q8N3J2 472 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 VPS37AQ8NEZ2 397 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 ZNF480Q8WV37 535 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 MYDGFQ969H8 173 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 TMEM159Q96B96 161 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 TXNDC15Q96J42 360 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 IL4I1Q96RQ9 567 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 FAM129BQ96TA1 746 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 HMX1Q9NP08 348 aaPredicted RBP13.55□□□□□ -0.24
SCFD1-203ENST00000458591 ACER3Q9NUN7 267 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 IFT52Q9Y366 437 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 CDH23Q9H251 3354 aa13.55□□□□□ -0.24
SCFD1-203ENST00000458591 H3BM21 787 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 RPLP0P05388 317 aaKnown RBP13.54□□□□□ -0.24
SCFD1-203ENST00000458591 CKMT1AP12532 417 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 TIMP2P16035 220 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 TAS2R50P59544 299 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 CSNK2BP67870 215 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 SLBPQ14493 270 aaKnown RBP eCLIP13.54□□□□□ -0.24
SCFD1-203ENST00000458591 GRIN2CQ14957 1233 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 TSTQ16762 297 aaKnown RBP13.54□□□□□ -0.24
SCFD1-203ENST00000458591 C10orf62Q5T681 223 aaPredicted RBP13.54□□□□□ -0.24
SCFD1-203ENST00000458591 CPXM2Q8N436 756 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 TCEAL4Q96EI5 215 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 C19orf43Q9BQ61 176 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 WFDC6Q9BQY6 131 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 YIPF2Q9BWQ6 316 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 C1GALT1Q9NS00 363 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 PCDHGA3Q9Y5H0 932 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 KLK1P06870 262 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 UGT2B10P36537 528 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 OPRD1P41143 372 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 HNF4AP41235 474 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 GJA8P48165 433 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 TBPL1P62380 186 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 DMC1Q14565 340 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 SF3B4Q15427 424 aaKnown RBP eCLIP13.54□□□□□ -0.242e-7■■■□□ 18
SCFD1-203ENST00000458591 NDUFA5Q16718 116 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 GCNT6Q5T4J0 391 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 USP43Q70EL4 1123 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 CCDC80Q76M96 950 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 GDPD3Q7L5L3 318 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 VWCEQ96DN2 955 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 IL17FQ96PD4 163 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 CTRCQ99895 268 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 WRAP53Q9BUR4 548 aaKnown RBP13.54□□□□□ -0.24
SCFD1-203ENST00000458591 CPEB1Q9BZB8 566 aaKnown RBP13.54□□□□□ -0.24
SCFD1-203ENST00000458591 ABCG4Q9H172 646 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 PLCXD1Q9NUJ7 323 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 ERVK13-1Q9NX77 482 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 SLC25A13Q9UJS0 675 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 PLAGL1Q9UM63 463 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 HCFC2Q9Y5Z7 792 aa13.54□□□□□ -0.24
SCFD1-203ENST00000458591 RFXAPO00287 272 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 SNPHO15079 494 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 ASNA1O43681 348 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 KIAA0513O60268 411 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 UGDHO60701 494 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 CYP7B1O75881 506 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 SOX14O95416 240 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 NPPBP16860 134 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 CNR2P34972 360 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 DEFB103AP81534 67 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 CDK6Q00534 326 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 TMEM115Q12893 351 aaPredicted RBP13.53□□□□□ -0.24
SCFD1-203ENST00000458591 ANXA8L1Q5VT79 327 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 OLIG3Q7RTU3 272 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 HMGN2P46Q86SG4 172 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 ADIPOR2Q86V24 386 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 AQP11Q8NBQ7 271 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 OR56A3Q8NH54 315 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 REEP4Q9H6H4 257 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 C11orf16Q9NQ32 467 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 IMPAD1Q9NX62 359 aa13.53□□□□□ -0.24
SCFD1-203ENST00000458591 C5AR2Q9P296 337 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms