RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 SHBGP04278 402 aa16.34■□□□□ 0.21
USP39-208ENST00000455732 SBK3P0C264 359 aa16.34■□□□□ 0.21
USP39-208ENST00000455732 ZNF10P21506 573 aaPredicted RBP16.34■□□□□ 0.21
USP39-208ENST00000455732 JAK1P23458 1154 aa16.34■□□□□ 0.21
USP39-208ENST00000455732 RHAGQ02094 409 aa16.34■□□□□ 0.21
USP39-208ENST00000455732 EEF1A2Q05639 463 aaKnown RBP16.34■□□□□ 0.21
USP39-208ENST00000455732 Q0VFX4 171 aa16.34■□□□□ 0.21
USP39-208ENST00000455732 PCOLCEQ15113 449 aa16.34■□□□□ 0.21
USP39-208ENST00000455732 SLC6A19Q695T7 634 aa16.34■□□□□ 0.21
USP39-208ENST00000455732 GOLGA7Q7Z5G4 137 aa16.34■□□□□ 0.21
USP39-208ENST00000455732 PLPP5Q8NEB5 264 aa16.34■□□□□ 0.21
USP39-208ENST00000455732 ZNF473Q8WTR7 871 aaKnown RBP16.34■□□□□ 0.21
USP39-208ENST00000455732 NPLQ9BXD5 320 aaPredicted RBP16.34■□□□□ 0.21
USP39-208ENST00000455732 MS4A8Q9BY19 250 aa16.34■□□□□ 0.21
USP39-208ENST00000455732 LHPPQ9H008 270 aa16.34■□□□□ 0.21
USP39-208ENST00000455732 ZNF160Q9HCG1 818 aa16.34■□□□□ 0.21
USP39-208ENST00000455732 C19orf25Q9UFG5 118 aaPredicted RBP16.34■□□□□ 0.21
USP39-208ENST00000455732 ADGRE2Q9UHX3 823 aa16.34■□□□□ 0.21
USP39-208ENST00000455732 LRRC14BA6NHZ5 514 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 TTLL8A6PVC2 850 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 MAGEB17A8MXT2 336 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 DNAJB6O75190 326 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 GSTA1P08263 222 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 RPS17P08708 135 aaKnown RBP16.33■□□□□ 0.2
USP39-208ENST00000455732 RNH1P13489 461 aaKnown RBP16.33■□□□□ 0.2
USP39-208ENST00000455732 ITGA3P26006 1051 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 EEF1DP29692 281 aaKnown RBP16.33■□□□□ 0.2
USP39-208ENST00000455732 OLR1P78380 273 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 TGM3Q08188 693 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 WDR93Q6P2C0 686 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 TRIM40Q6P9F5 258 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 ABHD17CQ6PCB6 329 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 RIPOR1Q6ZS17 1223 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 L3MBTL4Q8NA19 623 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 OR7G3Q8NG95 312 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 PNPLA2Q96AD5 504 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 PHF21BQ96EK2 531 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 FAR2Q96K12 515 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 QRFPRQ96P65 431 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 TUBB6Q9BUF5 446 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 C1QTNF3Q9BXJ4 246 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 MFRPQ9BY79 579 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 RBCK1Q9BYM8 510 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 IPPKQ9H8X2 491 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 ACTR8Q9H981 624 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 ZBTB20Q9HC78 741 aaPredicted RBP16.33■□□□□ 0.2
USP39-208ENST00000455732 PCTPQ9UKL6 214 aa16.33■□□□□ 0.2
USP39-208ENST00000455732 USP9XQ93008 2570 aaPredicted RBP16.33■□□□□ 0.2
USP39-208ENST00000455732 H0YIV9 168 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 SERPINA7P05543 415 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 PIK3CBP42338 1070 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 AP2B1P63010 937 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 BTN3A2P78410 334 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 TMEM35AQ53FP2 167 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 MFSD4BQ5TF39 518 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 IRAK1BP1Q5VVH5 260 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 FAAH2Q6GMR7 532 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 QSOX2Q6ZRP7 698 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 LANCL3Q6ZV70 420 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 CPEB2Q7Z5Q1 589 aaKnown RBP16.32■□□□□ 0.2
USP39-208ENST00000455732 PARP9Q8IXQ6 854 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 KBTBD2Q8IY47 623 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 CA13Q8N1Q1 262 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 SRFBP1Q8NEF9 429 aaKnown RBP16.32■□□□□ 0.2
USP39-208ENST00000455732 CPT1CQ8TCG5 803 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 ADAMTS18Q8TE60 1221 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 AENQ8WTP8 325 aaKnown RBP16.32■□□□□ 0.2
USP39-208ENST00000455732 REPS1Q96D71 796 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 IMMP1LQ96LU5 166 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 KCNC2Q96PR1 638 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 SERINC2Q96SA4 455 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 ROGDIQ9GZN7 287 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 PCDHGA11Q9Y5H2 935 aa16.32■□□□□ 0.2
USP39-208ENST00000455732 A8MT66 165 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 PSMD12O00232 456 aaPredicted RBP16.31■□□□□ 0.2
USP39-208ENST00000455732 OR7A17O14581 309 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 B3GALT2O43825 422 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 CDC123O75794 336 aaPredicted RBP16.31■□□□□ 0.2
USP39-208ENST00000455732 SCELO95171 688 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 PRR35P0CG20 571 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 ICAM2P13598 275 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 HSD17B3P37058 310 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 PLA2G16P53816 162 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 MTTPP55157 894 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 ABRAXAS2Q15018 415 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 PLEKHN1Q494U1 663 aaPredicted RBP16.31■□□□□ 0.2
USP39-208ENST00000455732 AGAP7PQ5VUJ5 663 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 EMBQ6PCB8 327 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 IGFL2Q6UWQ7 119 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 ANKRD37Q7Z713 158 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 TM9SF4Q92544 642 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 CMTM7Q96FZ5 175 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 THOC3Q96J01 351 aaKnown RBP16.31■□□□□ 0.2
USP39-208ENST00000455732 AGAP4Q96P64 663 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 WDR77Q9BQA1 342 aaPredicted RBP16.31■□□□□ 0.2
USP39-208ENST00000455732 TBCDQ9BTW9 1192 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 NTMT1Q9BV86 223 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 NOL11Q9H8H0 719 aaKnown RBP16.31■□□□□ 0.2
USP39-208ENST00000455732 DMRT3Q9NQL9 472 aa16.31■□□□□ 0.2
USP39-208ENST00000455732 TMEM216Q9P0N5 145 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms