RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 TAS2R9Q9NYW1 312 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 PDP1Q9P0J1 537 aaPredicted RBP11.25□□□□□ -0.61
VTA1-203ENST00000452973 SCHIP1Q9P0W5 487 aaPredicted RBP11.25□□□□□ -0.61
VTA1-203ENST00000452973 IFT80Q9P2H3 777 aaPredicted RBP11.25□□□□□ -0.61
VTA1-203ENST00000452973 PCDHGA8Q9Y5G5 932 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 PIAS3Q9Y6X2 628 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 TICRRQ7Z2Z1 1910 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 CXCR2P25025 360 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 ACSL1P33121 698 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 ARHGAP19Q14CB8 494 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 CAMKMTQ7Z624 323 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 SMYD1Q8NB12 490 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 OR52E1Q8NGJ3 308 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 TSACCQ96A04 125 aaPredicted RBP11.25□□□□□ -0.61
VTA1-203ENST00000452973 PADI4Q9UM07 663 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 MAPRE3Q9UPY8 281 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 SNX11Q9Y5W9 270 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 H0YAE9 185 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 GSSP48637 474 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 RAB28P51157 221 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 CRYBA2P53672 197 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 MAPK10P53779 464 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 MANFP55145 182 aaKnown RBP11.24□□□□□ -0.61
VTA1-203ENST00000452973 ESRRGP62508 458 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 PIGFQ07326 219 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 KCTD21Q4G0X4 260 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 USP51Q70EK9 711 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 CBLL1Q75N03 491 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 EIF3MQ7L2H7 374 aaKnown RBP11.24□□□□□ -0.61
VTA1-203ENST00000452973 LPCAT2Q7L5N7 544 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 DCP2Q8IU60 420 aaKnown RBP11.24□□□□□ -0.61
VTA1-203ENST00000452973 OR4E2Q8NGC2 313 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 OR52J3Q8NH60 311 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 CCL4L1Q8NHW4 92 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 PDXPQ96GD0 296 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 MAGED4Q96JG8 741 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 PHF12Q96QT6 1004 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 MS4A8Q9BY19 250 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 POLR1BQ9H9Y6 1135 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 ADPRHL2Q9NX46 363 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 TEX10Q9NXF1 929 aaPredicted RBP11.24□□□□□ -0.61
VTA1-203ENST00000452973 KIF17Q9P2E2 1029 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 C3orf18Q9UK00 162 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 DMTF1Q9Y222 760 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 ZNF451Q9Y4E5 1061 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 DNMT3AQ9Y6K1 912 aaPredicted RBP11.24□□□□□ -0.61
VTA1-203ENST00000452973 CKAP5Q14008 2032 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 PTGES3LE9PB15 166 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 AHCYL1O43865 530 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 PRKRAO75569 313 aaKnown RBP11.24□□□□□ -0.61
VTA1-203ENST00000452973 IGFBP5P24593 272 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 CLCN2P51788 898 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 CSNK1G2P78368 415 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 C10orf62Q5T681 223 aaPredicted RBP11.24□□□□□ -0.61
VTA1-203ENST00000452973 TNFAIP8L2Q6P589 184 aaPredicted RBP11.24□□□□□ -0.61
VTA1-203ENST00000452973 THAP5Q7Z6K1 395 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 CYP4Z1Q86W10 505 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 HIPK1Q86Z02 1210 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 CLVS1Q8IUQ0 354 aaPredicted RBP11.24□□□□□ -0.61
VTA1-203ENST00000452973 GALNT15Q8N3T1 639 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 ATG16L2Q8NAA4 619 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 OR2A1Q8NGT9 310 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 C1QTNF7Q9BXJ2 289 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 RBM38Q9H0Z9 239 aaKnown RBP11.24□□□□□ -0.61
VTA1-203ENST00000452973 SPHK1Q9NYA1 384 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 CORO2BQ9UQ03 480 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 SH3GLB1Q9Y371 365 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 TESMINQ9Y4I5 508 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 CEPT1Q9Y6K0 416 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 IGKV1-8A0A0C4DH67 115 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 LOC100130705A0A1B0GUX0 176 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 M0QX08 132 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 TMPRSS11DO60235 418 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 EML2O95834 649 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 CDH2P19022 906 aaPredicted RBP11.24□□□□□ -0.61
VTA1-203ENST00000452973 AGXTP21549 392 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 PPIBP23284 216 aaKnown RBP11.24□□□□□ -0.61
VTA1-203ENST00000452973 PCSK6P29122 969 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 SSR2P43308 183 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 MVDP53602 400 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 SCARB2Q14108 478 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 TTC23Q5W5X9 447 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 KIAA1161Q6NSJ0 714 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 MTSS1LQ765P7 747 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 GPR155Q7Z3F1 870 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 GPR141Q7Z602 305 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 FRMD1Q8N878 549 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 RPLP0P6Q8NHW5 317 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 CXorf40BQ96DE9 158 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 KLHL31Q9H511 634 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 CXorf36Q9H7Y0 433 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 REEP1Q9H902 201 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 MRPS30Q9NP92 439 aaKnown RBP11.24□□□□□ -0.61
VTA1-203ENST00000452973 SLAMF7Q9NQ25 335 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 COMMD3-BMI1R4GMX3 469 aa11.24□□□□□ -0.61
VTA1-203ENST00000452973 DENND4AQ7Z401 1863 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 ISM1B1AKI9 464 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 NDUFS4O43181 175 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 GCM2O75603 506 aaPredicted RBP11.23□□□□□ -0.61
VTA1-203ENST00000452973 ALPPL2P10696 532 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 256.1 ms