RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 NBPF19A0A087WUL8 3843 aa15.06■□□□□ 0
SGCE-208ENST00000450385 IGKV3D-11A0A0A0MRZ8 115 aa15.05■□□□□ -0
SGCE-208ENST00000450385 TCRBV16S1A1N1A0A5B0 115 aa15.05■□□□□ -0
SGCE-208ENST00000450385 A8MUI8 341 aa15.05■□□□□ -0
SGCE-208ENST00000450385 PHGDHO43175 533 aaKnown RBP15.05■□□□□ -0
SGCE-208ENST00000450385 KERAO60938 352 aa15.05■□□□□ -0
SGCE-208ENST00000450385 SLC35E2BP0CK96 405 aa15.05■□□□□ -0
SGCE-208ENST00000450385 GDF5P43026 501 aa15.05■□□□□ -0
SGCE-208ENST00000450385 ARFIP1P53367 373 aa15.05■□□□□ -0
SGCE-208ENST00000450385 SLC26A5P58743 744 aa15.05■□□□□ -0
SGCE-208ENST00000450385 MRPS25P82663 173 aaKnown RBP15.05■□□□□ -0
SGCE-208ENST00000450385 BIKQ13323 160 aa15.05■□□□□ -0
SGCE-208ENST00000450385 SLBPQ14493 270 aaKnown RBP eCLIP15.05■□□□□ -0
SGCE-208ENST00000450385 EFTUD2Q15029 972 aaKnown RBP eCLIP15.05■□□□□ -0
SGCE-208ENST00000450385 OR4D1Q15615 310 aa15.05■□□□□ -0
SGCE-208ENST00000450385 C4orf17Q53FE4 359 aa15.05■□□□□ -0
SGCE-208ENST00000450385 TMEM35AQ53FP2 167 aa15.05■□□□□ -0
SGCE-208ENST00000450385 ZNF595Q8IYB9 648 aa15.05■□□□□ -0
SGCE-208ENST00000450385 OR5T3Q8NGG3 340 aa15.05■□□□□ -0
SGCE-208ENST00000450385 SERINC2Q96SA4 455 aa15.05■□□□□ -0
SGCE-208ENST00000450385 UTP23Q9BRU9 249 aaKnown RBP15.05■□□□□ -0
SGCE-208ENST00000450385 REXO4Q9GZR2 422 aaKnown RBP15.05■□□□□ -0
SGCE-208ENST00000450385 KLHL31Q9H511 634 aa15.05■□□□□ -0
SGCE-208ENST00000450385 ZDHHC18Q9NUE0 388 aa15.05■□□□□ -0
SGCE-208ENST00000450385 PLA2G3Q9NZ20 509 aa15.05■□□□□ -0
SGCE-208ENST00000450385 PPIEQ9UNP9 301 aaKnown RBP15.05■□□□□ -0
SGCE-208ENST00000450385 UTP20O75691 2785 aaKnown RBP15.04■□□□□ -0
SGCE-208ENST00000450385 NCF1BA6NI72 391 aaPredicted RBP15.04■□□□□ -0
SGCE-208ENST00000450385 SAGE2PA6NJ88 616 aa15.04■□□□□ -0
SGCE-208ENST00000450385 NCF1CA8MVU1 366 aaPredicted RBP15.04■□□□□ -0
SGCE-208ENST00000450385 KIF2AO00139 706 aaPredicted RBP15.04■□□□□ -0
SGCE-208ENST00000450385 E2F3O00716 465 aa15.04■□□□□ -0
SGCE-208ENST00000450385 B3GALT2O43825 422 aa15.04■□□□□ -0
SGCE-208ENST00000450385 LDLRP01130 860 aa15.04■□□□□ -0
SGCE-208ENST00000450385 STSP08842 583 aa15.04■□□□□ -0
SGCE-208ENST00000450385 NCF1P14598 390 aaPredicted RBP15.04■□□□□ -0
SGCE-208ENST00000450385 CD46P15529 392 aa15.04■□□□□ -0
SGCE-208ENST00000450385 KCNC1P48547 511 aa15.04■□□□□ -0
SGCE-208ENST00000450385 RAB8AP61006 207 aa15.04■□□□□ -0
SGCE-208ENST00000450385 ACAP2Q15057 778 aa15.04■□□□□ -0
SGCE-208ENST00000450385 XKR6Q5GH73 641 aa15.04■□□□□ -0
SGCE-208ENST00000450385 TOR1AIP1Q5JTV8 583 aa15.04■□□□□ -0
SGCE-208ENST00000450385 KLC3Q6P597 504 aa15.04■□□□□ -0
SGCE-208ENST00000450385 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.04■□□□□ -0
SGCE-208ENST00000450385 CA13Q8N1Q1 262 aa15.04■□□□□ -0
SGCE-208ENST00000450385 MMGT1Q8N4V1 131 aa15.04■□□□□ -0
SGCE-208ENST00000450385 TMEM178AQ8NBL3 297 aa15.04■□□□□ -0
SGCE-208ENST00000450385 UBTD2Q8WUN7 234 aa15.04■□□□□ -0
SGCE-208ENST00000450385 KCNC2Q96PR1 638 aa15.04■□□□□ -0
SGCE-208ENST00000450385 TMEM79Q9BSE2 394 aa15.04■□□□□ -0
SGCE-208ENST00000450385 FUT8Q9BYC5 575 aa15.04■□□□□ -0
SGCE-208ENST00000450385 TRIM45Q9H8W5 580 aaPredicted RBP15.04■□□□□ -0
SGCE-208ENST00000450385 PLEKHB1Q9UF11 243 aaPredicted RBP15.04■□□□□ -0
SGCE-208ENST00000450385 TSC22D4Q9Y3Q8 395 aa15.04■□□□□ -0
SGCE-208ENST00000450385 IGHV3-20A0A0C4DH32 117 aa15.03■□□□□ -0
SGCE-208ENST00000450385 ZNF860A6NHJ4 632 aa15.03■□□□□ -0
SGCE-208ENST00000450385 K7EPI3 171 aa15.03■□□□□ -0
SGCE-208ENST00000450385 ERI3O43414 337 aaKnown RBP15.03■□□□□ -0
SGCE-208ENST00000450385 UGDHO60701 494 aa15.03■□□□□ -0
SGCE-208ENST00000450385 B4GALT2O60909 372 aa15.03■□□□□ -0
SGCE-208ENST00000450385 CDC123O75794 336 aaPredicted RBP15.03■□□□□ -0
SGCE-208ENST00000450385 PIAS1O75925 651 aa15.03■□□□□ -0
SGCE-208ENST00000450385 CELA2AP08217 269 aa15.03■□□□□ -0
SGCE-208ENST00000450385 TFEBP19484 476 aa15.03■□□□□ -0
SGCE-208ENST00000450385 HSPA7P48741 367 aa15.03■□□□□ -0
SGCE-208ENST00000450385 MTTPP55157 894 aa15.03■□□□□ -0
SGCE-208ENST00000450385 RAB38P57729 211 aa15.03■□□□□ -0
SGCE-208ENST00000450385 BTN3A2P78410 334 aa15.03■□□□□ -0
SGCE-208ENST00000450385 IRF8Q02556 426 aa15.03■□□□□ -0
SGCE-208ENST00000450385 DOC2AQ14183 400 aa15.03■□□□□ -0
SGCE-208ENST00000450385 KRTCAP3Q53RY4 240 aa15.03■□□□□ -0
SGCE-208ENST00000450385 ZNF766Q5HY98 468 aa15.03■□□□□ -0
SGCE-208ENST00000450385 CHSY3Q70JA7 882 aa15.03■□□□□ -0
SGCE-208ENST00000450385 RPS19BP1Q86WX3 136 aaKnown RBP15.03■□□□□ -0
SGCE-208ENST00000450385 SNX31Q8N9S9 440 aa15.03■□□□□ -0
SGCE-208ENST00000450385 FAM98AQ8NCA5 519 aaKnown RBP15.03■□□□□ -0
SGCE-208ENST00000450385 MAGEB10Q96LZ2 347 aaPredicted RBP15.03■□□□□ -0
SGCE-208ENST00000450385 ATOH8Q96SQ7 321 aa15.03■□□□□ -0
SGCE-208ENST00000450385 LRRC1Q9BTT6 524 aa15.03■□□□□ -0
SGCE-208ENST00000450385 TBCDQ9BTW9 1192 aa15.03■□□□□ -0
SGCE-208ENST00000450385 LYRM4Q9HD34 91 aa15.03■□□□□ -0
SGCE-208ENST00000450385 PSD3Q9NYI0 1048 aa15.03■□□□□ -0
SGCE-208ENST00000450385 ERRFI1Q9UJM3 462 aaPredicted RBP15.03■□□□□ -0
SGCE-208ENST00000450385 ZNF490Q9ULM2 529 aaPredicted RBP15.03■□□□□ -0
SGCE-208ENST00000450385 TNPO3Q9Y5L0 923 aaKnown RBP15.03■□□□□ -0
SGCE-208ENST00000450385 OR2W5A6NFC9 320 aa15.02■□□□□ -0
SGCE-208ENST00000450385 FCHO1O14526 889 aa15.02■□□□□ -0
SGCE-208ENST00000450385 URI1O94763 535 aaPredicted RBP15.02■□□□□ -0
SGCE-208ENST00000450385 EPB42P16452 691 aa15.02■□□□□ -0
SGCE-208ENST00000450385 HNRNPH1P31943 449 aaKnown RBP15.02■□□□□ -0
SGCE-208ENST00000450385 TRHRP34981 398 aaPredicted RBP15.02■□□□□ -0
SGCE-208ENST00000450385 HNF4AP41235 474 aa15.02■□□□□ -0
SGCE-208ENST00000450385 PIK3CGP48736 1102 aa15.02■□□□□ -0
SGCE-208ENST00000450385 RBPJQ06330 500 aa15.02■□□□□ -0
SGCE-208ENST00000450385 TUBA3CQ13748 450 aa15.02■□□□□ -0
SGCE-208ENST00000450385 SLMAPQ14BN4 828 aa15.02■□□□□ -0
SGCE-208ENST00000450385 LIPJQ5W064 366 aa15.02■□□□□ -0
SGCE-208ENST00000450385 MTFR2Q6P444 385 aa15.02■□□□□ -0
SGCE-208ENST00000450385 ABHD17CQ6PCB6 329 aa15.02■□□□□ -0
SGCE-208ENST00000450385 TUBA3EQ6PEY2 450 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms