RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 SERPINB3P29508 390 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 MPIP34949 423 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 PCYT1AP49585 367 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 SSR4P51571 173 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 PPIAP62937 165 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 ARF5P84085 180 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 CRYMQ14894 314 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 MAPK14Q16539 360 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 RFTN2Q52LD8 501 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 C10orf62Q5T681 223 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLC23A3Q6PIS1 610 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 FIP1L1Q6UN15 594 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 SUSD1Q6UWL2 747 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 ADAMTSL4Q6UY14 1074 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZNF621Q6ZSS3 439 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 ALDH16A1Q8IZ83 802 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 CADM2Q8N3J6 435 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 COX18Q8N8Q8 333 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 DTX3LQ8TDB6 740 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 ABTB1Q969K4 478 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 AMDHD1Q96NU7 426 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 WDR77Q9BQA1 342 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 CDH20Q9HBT6 801 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 C14orf105Q9NVL8 296 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMCC3Q9ULS5 477 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 SIPA1L3O60292 1781 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 ALPK2Q86TB3 2170 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLCO1B7G3V0H7 640 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMCC2O75069 709 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 CSF2P04141 144 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 TFE3P19532 575 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 IL4RP24394 825 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 SSTR1P30872 391 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 HNRNPH3P31942 346 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 ASMTP46597 345 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 TLE1Q04724 770 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 KCNC3Q14003 757 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 CCDC153Q494R4 210 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 C6orf120Q7Z4R8 191 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMEM102Q8N9M5 508 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 PLAAQ9Y263 795 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 JRKO75564 520 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 ETS1P14921 441 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 IL1R2P27930 398 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 NUDT6P53370 316 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 AIMP2Q13155 320 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 C9orf152Q5JTZ5 239 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 HMBOX1Q6NT76 420 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 KIAA1191Q96A73 305 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 PYCR2Q96C36 320 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 PITPNM3Q9BZ71 974 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 RASSF4Q9H2L5 321 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 DDX28Q9NUL7 540 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 ARHGEF17Q96PE2 2063 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 NUDT21O43809 227 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 C2orf80Q0P641 193 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 CLPPQ16740 277 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF572Q7Z3I7 529 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 TRIM73Q86UV7 250 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 KMT5CQ86Y97 462 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 TNIP2Q8NFZ5 429 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 PEX13Q92968 403 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 MRPL57Q9BQC6 102 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF160Q9HCG1 818 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 TMEM184CQ9NVA4 438 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 CNTN6Q9UQ52 1028 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 OR51F1A6NGY5 319 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 FAM166BA8MTA8 275 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 WASH4PA8MWX3 477 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 ASNA1O43681 348 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 DDAH2O95865 285 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 KRT8P05787 483 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 IL1RNP18510 177 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 ST13P50502 369 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 SERTAD2Q14140 314 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 KLHL26Q53HC5 615 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 LANCL3Q6ZV70 420 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 TMPRSS9Q7Z410 1059 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 SLC22A15Q8IZD6 547 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 ASB12Q8WXK4 309 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 THAP11Q96EK4 314 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 IPPKQ9H8X2 491 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 NLE1Q9NVX2 485 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 ADA2Q9NZK5 511 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 SLC24A2Q9UI40 661 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 PYCARDQ9ULZ3 195 aa5.4□□□□□ -1.55
CDC42BPA-209ENST00000448940 SNRNP200O75643 2136 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 MED19A0JLT2 244 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 RNF212BA8MTL3 300 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 MAFKO60675 156 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 ANXA4P09525 319 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 KIR2DL3P43628 341 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 CDKN1CP49918 316 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 OR2B6P58173 313 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 SLC29A2Q14542 456 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 RPE65Q16518 533 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 CCDC54Q8NEL0 328 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 NUP37Q8NFH4 326 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 SSC4DQ8WTU2 575 aa5.39□□□□□ -1.55
CDC42BPA-209ENST00000448940 FUCA2Q9BTY2 467 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms