RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 HIST2H2ACQ16777 129 aaPredicted RBP18.48■□□□□ 0.55
VCP-203ENST00000448530 FBXO48Q5FWF7 155 aa18.48■□□□□ 0.55
VCP-203ENST00000448530 PAGE2BQ5JRK9 111 aa18.48■□□□□ 0.55
VCP-203ENST00000448530 ZNF324BQ6AW86 544 aaPredicted RBP18.48■□□□□ 0.55
VCP-203ENST00000448530 HIST2H2AA3Q6FI13 130 aa18.48■□□□□ 0.55
VCP-203ENST00000448530 TRIM40Q6P9F5 258 aa18.48■□□□□ 0.55
VCP-203ENST00000448530 TUBA3EQ6PEY2 450 aa18.48■□□□□ 0.55
VCP-203ENST00000448530 ZDHHC24Q6UX98 284 aa18.48■□□□□ 0.55
VCP-203ENST00000448530 GFRALQ6UXV0 394 aa18.48■□□□□ 0.55
VCP-203ENST00000448530 ZNF572Q7Z3I7 529 aaPredicted RBP18.48■□□□□ 0.55
VCP-203ENST00000448530 LGI4Q8N135 537 aa18.48■□□□□ 0.55
VCP-203ENST00000448530 CA13Q8N1Q1 262 aa18.48■□□□□ 0.55
VCP-203ENST00000448530 PDPRQ8NCN5 879 aa18.48■□□□□ 0.55
VCP-203ENST00000448530 ESAMQ96AP7 390 aa18.48■□□□□ 0.55
VCP-203ENST00000448530 MS4A6EQ96DS6 147 aa18.48■□□□□ 0.55
VCP-203ENST00000448530 PTCD3Q96EY7 689 aaKnown RBP18.48■□□□□ 0.55
VCP-203ENST00000448530 EFCAB11Q9BUY7 163 aa18.48■□□□□ 0.55
VCP-203ENST00000448530 NPLQ9BXD5 320 aaPredicted RBP18.48■□□□□ 0.55
VCP-203ENST00000448530 ALG9Q9H6U8 611 aa18.48■□□□□ 0.55
VCP-203ENST00000448530 DIDO1Q9BTC0 2240 aaKnown RBP18.47■□□□□ 0.55
VCP-203ENST00000448530 A0A0G2JN53 185 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 A0A1B0GUH1 482 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 LRIT2A6NDA9 550 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 GABRR3A8MPY1 467 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 FAM227AF5H4B4 570 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 CLDN4O14493 209 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 B3GALT2O43825 422 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 CD46P15529 392 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 TFEBP19484 476 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 HNRNPH1P31943 449 aaKnown RBP18.47■□□□□ 0.55
VCP-203ENST00000448530 SLC7A5Q01650 507 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 IRF8Q02556 426 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 TGM3Q08188 693 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 TRADDQ15628 312 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 HIST2H2BCQ6DN03 193 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 CMC1Q7Z7K0 106 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 ADAMTS18Q8TE60 1221 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 REXO4Q9GZR2 422 aaKnown RBP18.47■□□□□ 0.55
VCP-203ENST00000448530 CDCP1Q9H5V8 836 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 COPS7BQ9H9Q2 264 aaPredicted RBP18.47■□□□□ 0.55
VCP-203ENST00000448530 ANKRD10Q9NXR5 420 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 NUDT4Q9NZJ9 180 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 COPG2Q9UBF2 871 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 PTBP2Q9UKA9 531 aaKnown RBP18.47■□□□□ 0.55
VCP-203ENST00000448530 MRPS33Q9Y291 106 aaKnown RBP18.47■□□□□ 0.55
VCP-203ENST00000448530 MMACHCQ9Y4U1 282 aa18.47■□□□□ 0.55
VCP-203ENST00000448530 TCRBV16S1A1N1A0A5B0 115 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 SAGE2PA6NJ88 616 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 SUPT3HB4E1H0 165 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 C4orf51C9J302 202 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 SUPT3HO75486 399 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 C1QAP02745 245 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 LTA4HP09960 611 aaKnown RBP18.46■□□□□ 0.55
VCP-203ENST00000448530 CD96P40200 585 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 TDGF1P3P51864 188 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 PLA2G16P53816 162 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 KCNK10P57789 538 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 DOC2AQ14183 400 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 RCN2Q14257 317 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 OR1C1Q15619 314 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 LRRC70Q7Z2Q7 622 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 RPS19BP1Q86WX3 136 aaKnown RBP18.46■□□□□ 0.55
VCP-203ENST00000448530 TMEM178AQ8NBL3 297 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 OR2L5Q8NG80 312 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 ELP5Q8TE02 316 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 CD244Q9BZW8 370 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 AICDAQ9GZX7 198 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 NECTIN3Q9NQS3 549 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 KLHL1Q9NR64 748 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 SEC14L3Q9UDX4 400 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 ACOT9Q9Y305 439 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 PCDHGB6Q9Y5F9 930 aa18.46■□□□□ 0.55
VCP-203ENST00000448530 ESYT3A0FGR9 886 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 A8MUA0 341 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 CDK2AP1O14519 115 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 URI1O94763 535 aaPredicted RBP18.45■□□□□ 0.54
VCP-203ENST00000448530 UNC5CO95185 931 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 MLYCDO95822 493 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 STSP08842 583 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 SLC35E2BP0CK96 405 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 EEF1DP29692 281 aaKnown RBP18.45■□□□□ 0.54
VCP-203ENST00000448530 RAB38P57729 211 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 RBPJQ06330 500 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 SLC13A2Q13183 592 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 CHIT1Q13231 466 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 CEP128Q6ZU80 1094 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 CCDC91Q7Z6B0 441 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 KIF2BQ8N4N8 673 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 FAM98AQ8NCA5 519 aaKnown RBP18.45■□□□□ 0.54
VCP-203ENST00000448530 MDS2Q8NDY4 140 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 UBE2E3Q969T4 207 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 MRRFQ96E11 262 aaKnown RBP18.45■□□□□ 0.54
VCP-203ENST00000448530 WDR34Q96EX3 536 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 C16orf45Q96MC5 204 aaPredicted RBP18.45■□□□□ 0.54
VCP-203ENST00000448530 SIGLEC12Q96PQ1 595 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 SERINC2Q96SA4 455 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 NPAS2Q99743 824 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 DEFB126Q9BYW3 111 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 PRTFDC1Q9NRG1 225 aa18.45■□□□□ 0.54
VCP-203ENST00000448530 IGKV3D-11A0A0A0MRZ8 115 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms