RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 KBTBD2Q8IY47 623 aa17.19■□□□□ 0.34
SMPD4-210ENST00000441135 L3MBTL4Q8NA19 623 aa17.19■□□□□ 0.34
SMPD4-210ENST00000441135 OR51Q1Q8NH59 317 aa17.19■□□□□ 0.34
SMPD4-210ENST00000441135 C8orf44Q96CB5 159 aa17.19■□□□□ 0.34
SMPD4-210ENST00000441135 THOC3Q96J01 351 aaKnown RBP17.19■□□□□ 0.34
SMPD4-210ENST00000441135 PARD6BQ9BYG5 372 aa17.19■□□□□ 0.34
SMPD4-210ENST00000441135 ROPN1BQ9BZX4 212 aaPredicted RBP17.19■□□□□ 0.34
SMPD4-210ENST00000441135 EPS8L2Q9H6S3 715 aa17.19■□□□□ 0.34
SMPD4-210ENST00000441135 ROPN1Q9HAT0 212 aaPredicted RBP17.19■□□□□ 0.34
SMPD4-210ENST00000441135 ZNF160Q9HCG1 818 aa17.19■□□□□ 0.34
SMPD4-210ENST00000441135 RIC8BQ9NVN3 520 aa17.19■□□□□ 0.34
SMPD4-210ENST00000441135 MAP10Q9P2G4 905 aa17.19■□□□□ 0.34
SMPD4-210ENST00000441135 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.19■□□□□ 0.34
SMPD4-210ENST00000441135 V9GYY5 206 aaPredicted RBP17.19■□□□□ 0.34
SMPD4-210ENST00000441135 A0A088AWK7 358 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 A8MT66 165 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 SGK494L7N484 410 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 FFAR3O14843 346 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 GPR42O15529 346 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 GLRA3O75311 464 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 SIX3O95343 332 aaPredicted RBP17.18■□□□□ 0.34
SMPD4-210ENST00000441135 PYGBP11216 843 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 ZNF10P21506 573 aaPredicted RBP17.18■□□□□ 0.34
SMPD4-210ENST00000441135 EEF1DP29692 281 aaKnown RBP17.18■□□□□ 0.34
SMPD4-210ENST00000441135 PIK3CBP42338 1070 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 Q0VFX4 171 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 DEFB134Q4QY38 66 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 ISLR2Q6UXK2 745 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 SRFBP1Q8NEF9 429 aaKnown RBP17.18■□□□□ 0.34
SMPD4-210ENST00000441135 EPS8L3Q8TE67 593 aaKnown RBP17.18■□□□□ 0.34
SMPD4-210ENST00000441135 ZNF473Q8WTR7 871 aaKnown RBP17.18■□□□□ 0.34
SMPD4-210ENST00000441135 REPS1Q96D71 796 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 MS4A6EQ96DS6 147 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 PHF21BQ96EK2 531 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 MAGEB10Q96LZ2 347 aaPredicted RBP17.18■□□□□ 0.34
SMPD4-210ENST00000441135 MESP1Q9BRJ9 268 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 NTMT1Q9BV86 223 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 NPLQ9BXD5 320 aaPredicted RBP17.18■□□□□ 0.34
SMPD4-210ENST00000441135 AICDAQ9GZX7 198 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 IPPKQ9H8X2 491 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 ZBTB20Q9HC78 741 aaPredicted RBP17.18■□□□□ 0.34
SMPD4-210ENST00000441135 TMEM216Q9P0N5 145 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 PCTPQ9UKL6 214 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 PCDHGA11Q9Y5H2 935 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 PCDHGA10Q9Y5H3 936 aa17.18■□□□□ 0.34
SMPD4-210ENST00000441135 LOC102723996A0A087X1L8 192 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 H0YIV9 168 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 RDH16O75452 317 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 TBX6O95947 436 aaPredicted RBP17.17■□□□□ 0.34
SMPD4-210ENST00000441135 SERPINA7P05543 415 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 KRT15P19012 456 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 ATP5F1P24539 256 aaPredicted RBP17.17■□□□□ 0.34
SMPD4-210ENST00000441135 XCR1P46094 333 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 SLCO1A2P46721 670 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 ARFIP1P53367 373 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 AP2B1P63010 937 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 MAT1AQ00266 395 aaKnown RBP17.17■□□□□ 0.34
SMPD4-210ENST00000441135 SRSF1Q07955 248 aaKnown RBP eCLIP17.17■□□□□ 0.34
SMPD4-210ENST00000441135 TGM3Q08188 693 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 MFAP5Q13361 173 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 SYT16Q17RD7 645 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 GGTA1PQ4G0N0 100 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 TMEM35AQ53FP2 167 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 TOR1AIP1Q5JTV8 583 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 TMEM205Q6UW68 189 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 RIPOR1Q6ZS17 1223 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 SLC22A9Q8IVM8 553 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 OR2L5Q8NG80 312 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 OR7G3Q8NG95 312 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 SNRNP40Q96DI7 357 aaKnown RBP17.17■□□□□ 0.34
SMPD4-210ENST00000441135 LMF1Q96S06 567 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 TMEM109Q9BVC6 243 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 REXO4Q9GZR2 422 aaKnown RBP17.17■□□□□ 0.34
SMPD4-210ENST00000441135 KLHL31Q9H511 634 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 ACTR8Q9H981 624 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 MKS1Q9NXB0 559 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 SCN3AQ9NY46 2000 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 PSD3Q9NYI0 1048 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 HCN3Q9P1Z3 774 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 LGALS13Q9UHV8 139 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 MKL2Q9ULH7 1088 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 PPT2Q9UMR5 302 aa17.17■□□□□ 0.34
SMPD4-210ENST00000441135 PRRC2CQ9Y520 2896 aaKnown RBP17.17■□□□□ 0.34
SMPD4-210ENST00000441135 USP9XQ93008 2570 aaPredicted RBP17.16■□□□□ 0.34
SMPD4-210ENST00000441135 RELNP78509 3460 aa17.16■□□□□ 0.34
SMPD4-210ENST00000441135 IGHV1-45A0A0A0MS14 117 aa17.16■□□□□ 0.34
SMPD4-210ENST00000441135 LRRC14BA6NHZ5 514 aa17.16■□□□□ 0.34
SMPD4-210ENST00000441135 TCP11X1B4DZS4 312 aa17.16■□□□□ 0.34
SMPD4-210ENST00000441135 GOLGA8RI6L899 631 aa17.16■□□□□ 0.34
SMPD4-210ENST00000441135 C8orf89P0DMQ9 161 aa17.16■□□□□ 0.34
SMPD4-210ENST00000441135 JAK1P23458 1154 aa17.16■□□□□ 0.34
SMPD4-210ENST00000441135 HNRNPH1P31943 449 aaKnown RBP17.16■□□□□ 0.34
SMPD4-210ENST00000441135 CRHR1P34998 444 aa17.16■□□□□ 0.34
SMPD4-210ENST00000441135 HERVK_113P63132 956 aa17.16■□□□□ 0.34
SMPD4-210ENST00000441135 EEF1A2Q05639 463 aaKnown RBP17.16■□□□□ 0.34
SMPD4-210ENST00000441135 CRB2Q5IJ48 1285 aa17.16■□□□□ 0.34
SMPD4-210ENST00000441135 FHL5Q5TD97 284 aa17.16■□□□□ 0.34
SMPD4-210ENST00000441135 B3GNTL1Q67FW5 361 aaPredicted RBP17.16■□□□□ 0.34
SMPD4-210ENST00000441135 TRIM40Q6P9F5 258 aa17.16■□□□□ 0.34
SMPD4-210ENST00000441135 CUZD1Q86UP6 607 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms