RNA–Protein interactions for RNA: ENST00000440346.1

PTPA-221, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-221ENST00000440346 AKIRIN1Q9H9L7 192 aaPredicted RBP6.77□□□□□ -1.33
PTPA-221ENST00000440346 BRF2Q9HAW0 419 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 KCND3Q9UK17 655 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 ZNF490Q9ULM2 529 aaPredicted RBP6.77□□□□□ -1.33
PTPA-221ENST00000440346 SNX6Q9UNH7 406 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.77□□□□□ -1.33
PTPA-221ENST00000440346 RNF11Q9Y3C5 154 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 ZGRF1Q86YA3 2104 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 PCSK5Q92824 1860 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 LOC105369274A0A096LPK9 316 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 LOC102723532A0A0G2JNH3 316 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 CDC14CA4D256 554 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 FOXE1O00358 373 aaPredicted RBP6.76□□□□□ -1.33
PTPA-221ENST00000440346 DSCR3O14972 297 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 NDUFS4O43181 175 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 HCRTR1O43613 425 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 CPNE3O75131 537 aaKnown RBP6.76□□□□□ -1.33
PTPA-221ENST00000440346 SCRG1O75711 98 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 DNAJB5O75953 348 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 OR4F21O95013 312 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 KRT6AP02538 564 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 KRT6BP04259 564 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 UROSP10746 265 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 HSD3B1P14060 373 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 CHN1P15882 459 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 HSD3B2P26439 372 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 HMOX2P30519 316 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 ARL1P40616 181 aaPredicted RBP6.76□□□□□ -1.33
PTPA-221ENST00000440346 TSFMP43897 325 aaKnown RBP6.76□□□□□ -1.33
PTPA-221ENST00000440346 KRT6CP48668 564 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 VSX2P58304 361 aaPredicted RBP6.76□□□□□ -1.33
PTPA-221ENST00000440346 STXBP1P61764 594 aaKnown RBP6.76□□□□□ -1.33
PTPA-221ENST00000440346 SKP1P63208 163 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 RGS1Q08116 209 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 CSTF3Q12996 717 aaKnown RBP6.76□□□□□ -1.33
PTPA-221ENST00000440346 CUL3Q13618 768 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 FAM53BQ14153 422 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 RBBP5Q15291 538 aaKnown RBP6.76□□□□□ -1.33
PTPA-221ENST00000440346 ZRSR2Q15696 482 aaKnown RBP6.76□□□□□ -1.33
PTPA-221ENST00000440346 CHI3L2Q15782 390 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 CPSF6Q16630 551 aaKnown RBP eCLIP6.76□□□□□ -1.33
PTPA-221ENST00000440346 NDUFA9Q16795 377 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 MUM1Q2TAK8 710 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 ADPRMQ3LIE5 342 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 C4orf17Q53FE4 359 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 WASHC2DQ5SRD0 308 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 FRG2Q64ET8 278 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 HIST2H2BCQ6DN03 193 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 PWWP2BQ6NUJ5 590 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 TMEM214Q6NUQ4 689 aaKnown RBP6.76□□□□□ -1.33
PTPA-221ENST00000440346 LETMD1Q6P1Q0 360 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 RPS27LQ71UM5 84 aaKnown RBP6.76□□□□□ -1.33
PTPA-221ENST00000440346 SYVN1Q86TM6 617 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 MYLK4Q86YV6 388 aaPredicted RBP6.76□□□□□ -1.33
PTPA-221ENST00000440346 TMEM126BQ8IUX1 230 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 PLD3Q8IV08 490 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.76□□□□□ -1.33
PTPA-221ENST00000440346 OR4N4Q8N0Y3 316 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 ARHGEF39Q8N4T4 335 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 CSNK1A1LQ8N752 337 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 ZNF740Q8NDX6 193 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 SRFBP1Q8NEF9 429 aaKnown RBP6.76□□□□□ -1.33
PTPA-221ENST00000440346 PROKR1Q8TCW9 393 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 CREB3L4Q8TEY5 395 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 ZNF473Q8WTR7 871 aaKnown RBP6.76□□□□□ -1.33
PTPA-221ENST00000440346 CMTM7Q96FZ5 175 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 FRG2BQ96QU4 278 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 NDC1Q9BTX1 674 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 SLC6A16Q9GZN6 736 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 ACTR5Q9H9F9 607 aaPredicted RBP6.76□□□□□ -1.33
PTPA-221ENST00000440346 CLK4Q9HAZ1 481 aaKnown RBP6.76□□□□□ -1.33
PTPA-221ENST00000440346 MLXIPLQ9NP71 852 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 MID1IP1Q9NPA3 183 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 LHX9Q9NQ69 397 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 INTS9Q9NV88 658 aaKnown RBP6.76□□□□□ -1.33
PTPA-221ENST00000440346 HAO1Q9UJM8 370 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 ZNF225Q9UK10 706 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 PADI1Q9ULC6 663 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 SLC22A7Q9Y694 548 aa6.76□□□□□ -1.33
PTPA-221ENST00000440346 A0A088AWK7 358 aa6.75□□□□□ -1.33
PTPA-221ENST00000440346 A0A1B0GTL3 188 aa6.75□□□□□ -1.33
PTPA-221ENST00000440346 A0A1B0GX78 115 aa6.75□□□□□ -1.33
PTPA-221ENST00000440346 HYKKA2RU49 373 aa6.75□□□□□ -1.33
PTPA-221ENST00000440346 WDR91A4D1P6 747 aa6.75□□□□□ -1.33
PTPA-221ENST00000440346 C21orf140B9A014 251 aa6.75□□□□□ -1.33
PTPA-221ENST00000440346 H0YIG0 161 aa6.75□□□□□ -1.33
PTPA-221ENST00000440346 PPP6CO00743 305 aa6.75□□□□□ -1.33
PTPA-221ENST00000440346 UBFD1O14562 309 aaKnown RBP6.75□□□□□ -1.33
PTPA-221ENST00000440346 AZIN1O14977 448 aa6.75□□□□□ -1.33
PTPA-221ENST00000440346 ZNF749O43361 778 aa6.75□□□□□ -1.33
PTPA-221ENST00000440346 SNNO75324 88 aaPredicted RBP6.75□□□□□ -1.33
PTPA-221ENST00000440346 ULK1O75385 1050 aa6.75□□□□□ -1.33
PTPA-221ENST00000440346 SORBS2O94875 1100 aaKnown RBP6.75□□□□□ -1.33
PTPA-221ENST00000440346 NSA2O95478 260 aaKnown RBP6.75□□□□□ -1.33
PTPA-221ENST00000440346 ONECUT2O95948 504 aa6.75□□□□□ -1.33
PTPA-221ENST00000440346 CHEK2O96017 543 aa6.75□□□□□ -1.33
PTPA-221ENST00000440346 EIF2S1P05198 315 aaKnown RBP6.75□□□□□ -1.33
PTPA-221ENST00000440346 CAPN1P07384 714 aa6.75□□□□□ -1.33
PTPA-221ENST00000440346 CD63P08962 238 aa6.75□□□□□ -1.33
PTPA-221ENST00000440346 CCNYL3P0C7X3 344 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms