RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 KCNK12Q9HB15 430 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 MBNL1Q9NR56 388 aaKnown RBP13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 ATAD3AQ9NVI7 634 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 C3orf18Q9UK00 162 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 BAG5Q9UL15 447 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 ZFR2Q9UPR6 939 aaKnown RBP13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 SAMD4AQ9UPU9 718 aaKnown RBP13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 B3GNT3Q9Y2A9 372 aa13.32□□□□□ -0.28
PTCHD3-201ENST00000438700 MYO10Q9HD67 2058 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 SERTM1A2A2V5 107 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 SCAMP2O15127 329 aaKnown RBP13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 XPNPEP2O43895 674 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 MYO1DO94832 1006 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 CYP4B1P13584 511 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 AQP1P29972 269 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 TRPC1P48995 793 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 MEF2AQ02078 507 aaPredicted RBP13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 FGL2Q14314 439 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 PAGE2BQ5JRK9 111 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 TMEM236Q5W0B7 351 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 CPZQ66K79 652 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 CEP68Q76N32 757 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 SLCO6A1Q86UG4 719 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 PTOV1Q86YD1 416 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 CHDHQ8NE62 594 aaPredicted RBP13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 OR8J2Q8NGG1 315 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 OR56A3Q8NH54 315 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 OR14C36Q8NHC7 312 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 NDNFQ8TB73 568 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 ITPKCQ96DU7 683 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 C11orf24Q96F05 449 aaPredicted RBP13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 RDH12Q96NR8 316 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 KLHL25Q9H0H3 589 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 EPS8L2Q9H6S3 715 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 TPT1P8Q9HAU6 139 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 USE1Q9NZ43 259 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 SH3BP4Q9P0V3 963 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 TMEFF2Q9UIK5 374 aaPredicted RBP13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 KCNE2Q9Y6J6 123 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 LOC100130705A0A1B0GUX0 176 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 FKBP9O95302 570 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 C1orf105O95561 183 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 PAK4O96013 591 aaPredicted RBP13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 DNTTP04053 509 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 POU3F3P20264 500 aaPredicted RBP13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 GSTM2P28161 218 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 VLDLRP98155 873 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 CD47Q08722 323 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 NFE2L1Q14494 772 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 IRF4Q15306 451 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 C6orf141Q5SZD1 244 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 MSANTD1Q6ZTZ1 278 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 FKBP9P1Q75LS8 142 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 TRMT11Q7Z4G4 463 aaKnown RBP13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 SLC44A3Q8N4M1 653 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 MAL2Q969L2 176 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 LINC00615Q96LM1 132 aaPredicted RBP13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 FAM120CQ9NX05 1096 aaKnown RBP13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 GPR34Q9UPC5 381 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 OR1A2Q9Y585 309 aa13.31□□□□□ -0.28
PTCHD3-201ENST00000438700 MGAT4DA6NG13 374 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 GPX2P18283 190 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 GAB1Q13480 694 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 BCL2A1Q16548 175 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 CPTPQ5TA50 214 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 ANGPTL8Q6UXH0 198 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 C11orf96Q7Z7L8 435 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 DCP2Q8IU60 420 aaKnown RBP13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 Q8N9G6 341 aaPredicted RBP13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 NRBF2Q96F24 287 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 TPD52L3Q96J77 140 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 MYOCQ99972 504 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 AKIP1Q9NQ31 210 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 PMF1-BGLAPU3KQ54 211 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 GOLGA4Q13439 2230 aaKnown RBP13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 PRMT3O60678 531 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 IGFBP5P24593 272 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 KDELR2P33947 212 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 MAGEA2P43356 314 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 NKX2-5P52952 324 aaPredicted RBP13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 VBP1P61758 197 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 EPS8Q12929 822 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 ZNF846Q147U1 533 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 SKIV2LQ15477 1246 aaKnown RBP13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 ADPRMQ3LIE5 342 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 SLCO4C1Q6ZQN7 724 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 FAM83HQ6ZRV2 1179 aaPredicted RBP13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 C2orf73Q8N5S3 287 aaPredicted RBP13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 OR2L2Q8NH16 312 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 CNIH3Q8TBE1 160 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 HSH2DQ96JZ2 352 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 BRF2Q9HAW0 419 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 IL1RAPQ9NPH3 570 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 TRPV5Q9NQA5 729 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 FZD4Q9ULV1 537 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 ORC6Q9Y5N6 252 aa13.3□□□□□ -0.28
PTCHD3-201ENST00000438700 C17orf113A0A1B0GUU1 675 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 A0A1W2PQU0 124 aa13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 PLRG1O43660 514 aaKnown RBP13.29□□□□□ -0.28
PTCHD3-201ENST00000438700 PCDH7O60245 1069 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms