RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ERI3O43414 337 aaKnown RBP15.98■□□□□ 0.15
TRIM39-209ENST00000428728 H2AFYO75367 372 aaKnown RBP15.98■□□□□ 0.15
TRIM39-209ENST00000428728 TNFRSF8P28908 595 aa15.98■□□□□ 0.15
TRIM39-209ENST00000428728 SLC6A12P48065 614 aa15.98■□□□□ 0.15
TRIM39-209ENST00000428728 MLF1P58340 268 aa15.98■□□□□ 0.15
TRIM39-209ENST00000428728 ART3Q13508 389 aa15.98■□□□□ 0.15
TRIM39-209ENST00000428728 TGFBIQ15582 683 aa15.98■□□□□ 0.15
TRIM39-209ENST00000428728 SLC25A25Q6KCM7 469 aa15.98■□□□□ 0.15
TRIM39-209ENST00000428728 MTFR2Q6P444 385 aa15.98■□□□□ 0.15
TRIM39-209ENST00000428728 SLCO4C1Q6ZQN7 724 aa15.98■□□□□ 0.15
TRIM39-209ENST00000428728 ZNF808Q8N4W9 903 aaPredicted RBP15.98■□□□□ 0.15
TRIM39-209ENST00000428728 THAP3Q8WTV1 239 aaPredicted RBP15.98■□□□□ 0.15
TRIM39-209ENST00000428728 FAR2Q96K12 515 aa15.98■□□□□ 0.15
TRIM39-209ENST00000428728 TMEM79Q9BSE2 394 aa15.98■□□□□ 0.15
TRIM39-209ENST00000428728 DEFB126Q9BYW3 111 aa15.98■□□□□ 0.15
TRIM39-209ENST00000428728 CLK4Q9HAZ1 481 aaKnown RBP15.98■□□□□ 0.15
TRIM39-209ENST00000428728 POPDC3Q9HBV1 291 aa15.98■□□□□ 0.15
TRIM39-209ENST00000428728 MTO1Q9Y2Z2 717 aaKnown RBP15.98■□□□□ 0.15
TRIM39-209ENST00000428728 TRBV11-1A0A0K0K1C0 115 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 ENO4A6NNW6 628 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 CXorf49A8MYA2 514 aaPredicted RBP15.97■□□□□ 0.15
TRIM39-209ENST00000428728 FCHO1O14526 889 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 NME2P1O60361 137 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 MYO1DO94832 1006 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 SNRPB2P08579 225 aaKnown RBP15.97■□□□□ 0.15
TRIM39-209ENST00000428728 ESRRAP11474 423 aaPredicted RBP15.97■□□□□ 0.15
TRIM39-209ENST00000428728 NME2P22392 152 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 SSTR1P30872 391 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 CYB561P49447 251 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 ADORA2A-AS1P86434 159 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 HSF1Q00613 529 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 TMIGD1Q6UXZ0 262 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 RPTNQ6XPR3 784 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 BNC2Q6ZN30 1099 aaPredicted RBP15.97■□□□□ 0.15
TRIM39-209ENST00000428728 MCEMP1Q8IX19 187 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 CPSF7Q8N684 471 aaKnown RBP15.97■□□□□ 0.15
TRIM39-209ENST00000428728 SNX31Q8N9S9 440 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 FAM47BQ8NA70 645 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 NFAM1Q8NET5 270 aaPredicted RBP15.97■□□□□ 0.15
TRIM39-209ENST00000428728 PYROXD1Q8WU10 500 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 EXT2Q93063 718 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 TMEM125Q96AQ2 219 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 MS4A6EQ96DS6 147 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 MCMBPQ9BTE3 642 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 DERL2Q9GZP9 239 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 SAYSD1Q9NPB0 183 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 PNO1Q9NRX1 252 aaKnown RBP15.97■□□□□ 0.15
TRIM39-209ENST00000428728 TXNDC16Q9P2K2 825 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 PYCARDQ9ULZ3 195 aa15.97■□□□□ 0.15
TRIM39-209ENST00000428728 PKDREJQ9NTG1 2253 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 FANCGO15287 622 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 CCDC166P0CW27 439 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 ABOP16442 354 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 ZNF24P17028 368 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 HTR1EP28566 365 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 PPP2R1BP30154 601 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 HSPA7P48741 367 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 HNRNPFP52597 415 aaKnown RBP15.96■□□□□ 0.15
TRIM39-209ENST00000428728 POU4F1Q01851 419 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 RUNX2Q13950 521 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 KRTCAP3Q53RY4 240 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 ADNP2Q6IQ32 1131 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 NCCRP1Q6ZVX7 275 aaPredicted RBP15.96■□□□□ 0.15
TRIM39-209ENST00000428728 ZNF227Q86WZ6 799 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 SPPL2CQ8IUH8 684 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 SIAH3Q8IW03 269 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 KLHDC8AQ8IYD2 350 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 KRT78Q8N1N4 520 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 B3GNT7Q8NFL0 401 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 TTLQ8NG68 377 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 ESAMQ96AP7 390 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 TSPAN17Q96FV3 270 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 PRTFDC1Q9NRG1 225 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 DNAJC11Q9NVH1 559 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 FBXW2Q9UKT8 454 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 MMACHCQ9Y4U1 282 aa15.96■□□□□ 0.15
TRIM39-209ENST00000428728 KLF2Q9Y5W3 355 aaPredicted RBP15.96■□□□□ 0.15
TRIM39-209ENST00000428728 LRIT2A6NDA9 550 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 ANKDD1BA6NHY2 528 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 TGFBR3LH3BV60 316 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 CLGNO14967 610 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 TAPBPO15533 448 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 ASNA1O43681 348 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 B3GALT2O43825 422 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 WISP3O95389 354 aaPredicted RBP15.95■□□□□ 0.14
TRIM39-209ENST00000428728 CERS1P27544 350 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 RFC3P40938 356 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 HLCSP50747 726 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 CLCN2P51788 898 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 PLA2G16P53816 162 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 RAB38P57729 211 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 CALCOCO2Q13137 446 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 SLC13A2Q13183 592 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 OR4D1Q15615 310 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 RNFT1Q5M7Z0 435 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 TRIM40Q6P9F5 258 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 CLNKQ7Z7G1 428 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 GPSM1Q86YR5 675 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 SCUBE1Q8IWY4 988 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 GHDCQ8N2G8 530 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms