RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 HRNRQ86YZ3 2850 aaPredicted RBP17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 FAM166BA8MTA8 275 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 NPIPA2E9PIF3 369 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 NPIPA3F8WFD2 350 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 TUBB4AP04350 444 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 MLNP12872 115 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 SSR4P51571 173 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 TIAL1Q01085 375 aaKnown RBP eCLIP17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 PLGLB1Q02325 96 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 CSHL1Q14406 222 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 HSP90AA5PQ58FG0 334 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 DUPD1Q68J44 220 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 PAOXQ6QHF9 649 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 PAQR3Q6TCH7 311 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 STRA8Q7Z7C7 330 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 CLYBLQ8N0X4 340 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 OR10Q1Q8NGQ4 319 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 PDLIM2Q96JY6 352 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 SERPINB12Q96P63 405 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 OR4K3Q96R72 315 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 CCDC77Q9BR77 488 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 SPNS1Q9H2V7 528 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 CLK4Q9HAZ1 481 aaKnown RBP17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 SLC24A3Q9HC58 644 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 PNO1Q9NRX1 252 aaKnown RBP17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 HOMER3Q9NSC5 361 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 IARS2Q9NSE4 1012 aaKnown RBP17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 KCMF1Q9P0J7 381 aa17.06■□□□□ 0.32
UPK3BP1-201ENST00000428678 URADA6NGE7 173 aa17.05■□□□□ 0.32
UPK3BP1-201ENST00000428678 KRT14P02533 472 aa17.05■□□□□ 0.32
UPK3BP1-201ENST00000428678 AHRP35869 848 aa17.05■□□□□ 0.32
UPK3BP1-201ENST00000428678 SCTRP47872 440 aa17.05■□□□□ 0.32
UPK3BP1-201ENST00000428678 PPIAP62937 165 aaKnown RBP17.05■□□□□ 0.32
UPK3BP1-201ENST00000428678 PSD4Q8NDX1 1056 aa17.05■□□□□ 0.32
UPK3BP1-201ENST00000428678 OR5M9Q8NGP3 310 aa17.05■□□□□ 0.32
UPK3BP1-201ENST00000428678 OR56A3Q8NH54 315 aa17.05■□□□□ 0.32
UPK3BP1-201ENST00000428678 SLC5A11Q8WWX8 675 aa17.05■□□□□ 0.32
UPK3BP1-201ENST00000428678 NEIL2Q969S2 332 aa17.05■□□□□ 0.32
UPK3BP1-201ENST00000428678 VMP1Q96GC9 406 aa17.05■□□□□ 0.32
UPK3BP1-201ENST00000428678 TSNARE1Q96NA8 513 aa17.05■□□□□ 0.32
UPK3BP1-201ENST00000428678 SLC6A16Q9GZN6 736 aa17.05■□□□□ 0.32
UPK3BP1-201ENST00000428678 PNPLA3Q9NST1 481 aa17.05■□□□□ 0.32
UPK3BP1-201ENST00000428678 DEPPQ9NTK1 212 aa17.05■□□□□ 0.32
UPK3BP1-201ENST00000428678 A8MVJ9 347 aa17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 ACOT7O00154 380 aa17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 KLK8O60259 260 aa17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 CDKN2DP55273 166 aa17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 FOLH1Q04609 750 aa17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 TERF2Q15554 542 aa17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 GXYLT1Q4G148 440 aa17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 HECTD2Q5U5R9 776 aa17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 C16orf47Q6ZP98 133 aaPredicted RBP17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 KIAA0408Q6ZU52 694 aa17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 CA13Q8N1Q1 262 aa17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 AGGF1Q8N302 714 aaeCLIP17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 CHDHQ8NE62 594 aaPredicted RBP17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 MCUQ8NE86 351 aa17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 TRPV3Q8NET8 790 aa17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 NCLNQ969V3 563 aa17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 TRIM54Q9BYV2 358 aa17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 KLHL31Q9H511 634 aa17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 CCM2LQ9NUG4 571 aaPredicted RBP17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 HPF1Q9NWY4 346 aa17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 DNAJB12Q9NXW2 375 aaKnown RBP17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 ZNF223Q9UK11 482 aaPredicted RBP17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 YARS2Q9Y2Z4 477 aaKnown RBP17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 MMACHCQ9Y4U1 282 aa17.04■□□□□ 0.32
UPK3BP1-201ENST00000428678 CTAGE15A4D2H0 777 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 PINLYPA6NC86 204 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 GUCA1CO95843 209 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 HOXB4P17483 251 aaPredicted RBP17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 ACVR2AP27037 513 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 PPP2R1BP30154 601 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 AP1S2P56377 157 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 PPP2R2AP63151 447 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 REEP5Q00765 189 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 RBBP5Q15291 538 aaKnown RBP17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 TOR1AIP1Q5JTV8 583 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 RBM20Q5T481 1227 aaKnown RBP17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 ZNF585AQ6P3V2 769 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 CTAGE6Q86UF2 777 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 TGIF2LYQ8IUE0 185 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 ANKRD53Q8N9V6 530 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 OR2M7Q8NG81 312 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 CREB3L4Q8TEY5 395 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 ATL1Q8WXF7 558 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 ASB15Q8WXK1 588 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 FBXL8Q96CD0 374 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 FOXC2Q99958 501 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 LIN28AQ9H9Z2 209 aaKnown RBP17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 DYRK1BQ9Y463 629 aa17.03■□□□□ 0.32
UPK3BP1-201ENST00000428678 A0A0G2JMM0 328 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 A0A1W2PPB8 328 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 A0A1W2PRS3 328 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 FAM221AA4D161 298 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 FIGNL2A6NMB9 653 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 KIR3DP1A8MWS1 328 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 C4orf51C9J302 202 aa17.02■□□□□ 0.32
UPK3BP1-201ENST00000428678 G3V3Y1 287 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms