RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 H2AFJQ9BTM1 129 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 C1QTNF6Q9BXI9 259 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 TAS2R7Q9NYW3 318 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 PRELID3BQ9Y3B1 194 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 PNMA8CA0A1B0GUJ8 204 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 SLC22A5O76082 557 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 GABARAPO95166 117 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 ADORA3P0DMS8 318 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 CD36P16671 472 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 CEBPBP17676 345 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 LHCGRP22888 699 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 S100A12P80511 92 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 KIAA1958Q8N8K9 716 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 MCOLN3Q8TDD5 553 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 THUMPD3Q9BV44 507 aaKnown RBP13.97□□□□□ -0.17
CHRD-204ENST00000420973 SLIRPQ9GZT3 109 aaKnown RBP13.97□□□□□ -0.17
CHRD-204ENST00000420973 MS4A7Q9GZW8 240 aaPredicted RBP13.97□□□□□ -0.17
CHRD-204ENST00000420973 TFB2MQ9H5Q4 396 aaKnown RBP13.97□□□□□ -0.17
CHRD-204ENST00000420973 ESR1P03372 595 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 HOXB1P14653 301 aaPredicted RBP13.96□□□□□ -0.17
CHRD-204ENST00000420973 OXTRP30559 389 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 CREB3L2Q70SY1 520 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 TRAPPC5Q8IUR0 188 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 ZBTB2Q8N680 514 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 OVCA2Q8WZ82 227 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 NCLNQ969V3 563 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 RIOK2Q9BVS4 552 aaKnown RBP13.96□□□□□ -0.17
CHRD-204ENST00000420973 MMP27Q9H306 513 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.96□□□□□ -0.17
CHRD-204ENST00000420973 MLXQ9UH92 298 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 GRIP1Q9Y3R0 1128 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 KPNA5O15131 536 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 SGCEO43556 437 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 CDK1P06493 297 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 RPIAP49247 311 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 MTPNP58546 118 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 ERVPABLB-1P60509 514 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 GTF2H2Q13888 395 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 INO80DQ53TQ3 878 aaPredicted RBP13.96□□□□□ -0.17
CHRD-204ENST00000420973 C6orf141Q5SZD1 244 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 GTF2H2CQ6P1K8 395 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 UBE2R2Q712K3 238 aaPredicted RBP13.96□□□□□ -0.17
CHRD-204ENST00000420973 MUL1Q969V5 352 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 TRMT2BQ96GJ1 504 aaKnown RBP13.96□□□□□ -0.17
CHRD-204ENST00000420973 SLC25A23Q9BV35 468 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 IL23AQ9NPF7 189 aa13.96□□□□□ -0.17
CHRD-204ENST00000420973 DNMT3AQ9Y6K1 912 aaPredicted RBP13.96□□□□□ -0.17
CHRD-204ENST00000420973 GNGT2O14610 69 aa13.96□□□□□ -0.18
CHRD-204ENST00000420973 LZTS3O60299 673 aaPredicted RBP13.96□□□□□ -0.18
CHRD-204ENST00000420973 OLFM2O95897 454 aa13.96□□□□□ -0.18
CHRD-204ENST00000420973 CHRM5P08912 532 aaPredicted RBP13.96□□□□□ -0.18
CHRD-204ENST00000420973 CAPN3P20807 821 aa13.96□□□□□ -0.18
CHRD-204ENST00000420973 CASP9P55211 416 aa13.96□□□□□ -0.18
CHRD-204ENST00000420973 GRIN2CQ14957 1233 aa13.96□□□□□ -0.18
CHRD-204ENST00000420973 ATP6AP1Q15904 470 aa13.96□□□□□ -0.18
CHRD-204ENST00000420973 RASSF6Q6ZTQ3 369 aa13.96□□□□□ -0.18
CHRD-204ENST00000420973 ATG16L2Q8NAA4 619 aa13.96□□□□□ -0.18
CHRD-204ENST00000420973 ZNF689Q96CS4 500 aaPredicted RBP13.96□□□□□ -0.18
CHRD-204ENST00000420973 DERL2Q9GZP9 239 aa13.96□□□□□ -0.18
CHRD-204ENST00000420973 TMEM181Q9P2C4 612 aa13.96□□□□□ -0.18
CHRD-204ENST00000420973 MAGED1Q9Y5V3 778 aaPredicted RBP13.96□□□□□ -0.18
CHRD-204ENST00000420973 CFAP20Q9Y6A4 193 aaKnown RBP13.96□□□□□ -0.18
CHRD-204ENST00000420973 HOXD4P09016 255 aaPredicted RBP13.95□□□□□ -0.18
CHRD-204ENST00000420973 RAB3AP20336 220 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 MYL9P24844 172 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 MAOBP27338 520 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 NRIP1P48552 1158 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 HSD17B7P56937 341 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 ZNF45Q02386 682 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 CHMP1BQ7LBR1 199 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 RETREG3Q86VR2 466 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 CHAC2Q8WUX2 184 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 KCNS3Q9BQ31 491 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 TMEM168Q9H0V1 697 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 KAT8Q9H7Z6 458 aaKnown RBP13.95□□□□□ -0.18
CHRD-204ENST00000420973 CCM2LQ9NUG4 571 aaPredicted RBP13.95□□□□□ -0.18
CHRD-204ENST00000420973 VCANP13611 3396 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 GNB5O14775 395 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 ADAM11O75078 769 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 RECQL5O94762 991 aaPredicted RBP13.95□□□□□ -0.18
CHRD-204ENST00000420973 ECDO95905 644 aaPredicted RBP13.95□□□□□ -0.18
CHRD-204ENST00000420973 DGKAP23743 735 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 DNAJB13P59910 316 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 EMX1Q04741 257 aaPredicted RBP13.95□□□□□ -0.18
CHRD-204ENST00000420973 AANATQ16613 207 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 CARD16Q5EG05 197 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 RBM48Q5RL73 367 aaKnown RBP13.95□□□□□ -0.18
CHRD-204ENST00000420973 C17orf107Q6ZR85 190 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 BTN2A1Q7KYR7 527 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 GOLGA7Q7Z5G4 137 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 CAMKK1Q8N5S9 505 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 MRPL43Q8N983 215 aaKnown RBP13.95□□□□□ -0.18
CHRD-204ENST00000420973 TMCO6Q96DC7 493 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 RNF170Q96K19 258 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 EBPLQ9BY08 206 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 RIBC2Q9H4K1 309 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 SPHK2Q9NRA0 654 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.95□□□□□ -0.18
CHRD-204ENST00000420973 LOC730098B7Z3J9 87 aa13.95□□□□□ -0.18
CHRD-204ENST00000420973 THRBP10828 461 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms