RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 DEFB110Q30KQ9 67 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 GAGE13Q4V321 117 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 PLEKHS1Q5SXH7 462 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 UBAP2Q5T6F2 1119 aaKnown RBP4.69□□□□□ -1.66
VPS41-205ENST00000414632 KLHL35Q6PF15 583 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 ZDHHC24Q6UX98 284 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 PIWIL4Q7Z3Z4 852 aaKnown RBP4.69□□□□□ -1.66
VPS41-205ENST00000414632 MAATS1Q7Z4T9 603 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 PRSS42Q7Z5A4 293 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 AMIGO1Q86WK6 493 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 LRRC6Q86X45 466 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 RASGRP3Q8IV61 690 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 TBC1D21Q8IYX1 336 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 ADGRF3Q8IZF5 1079 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 CMTM4Q8IZR5 234 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 LSMEM2Q8N112 164 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 BMPERQ8N8U9 685 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 GPATCH11Q8N954 259 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 PPFIBP2Q8ND30 876 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 ZNF248Q8NDW4 579 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 OR14K1Q8NGZ2 314 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 OR5K2Q8NHB8 316 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 FBXO25Q8TCJ0 367 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 ASZ1Q8WWH4 475 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 GRAMD1AQ96CP6 724 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 ZDHHC12Q96GR4 267 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 PANX3Q96QZ0 392 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 DPYSL5Q9BPU6 564 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 FAM167BQ9BTA0 163 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 RAB17Q9H0T7 212 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 CCDC68Q9H2F9 335 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 ZNF768Q9H5H4 540 aaKnown RBP4.69□□□□□ -1.66
VPS41-205ENST00000414632 MVB12BQ9H7P6 319 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 SMYD2Q9NRG4 433 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 INTS10Q9NVR2 710 aaKnown RBP4.69□□□□□ -1.66
VPS41-205ENST00000414632 SOHLH2Q9NX45 425 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 LRFN1Q9P244 771 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 PDP2Q9P2J9 529 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 DKK4Q9UBT3 224 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 ITGB1BP2Q9UKP3 347 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 UTP11Q9Y3A2 253 aaKnown RBP4.69□□□□□ -1.66
VPS41-205ENST00000414632 PSAT1Q9Y617 370 aa4.69□□□□□ -1.66
VPS41-205ENST00000414632 PIPSLA2A3N6 862 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 TLCD2A6NGC4 264 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 ARHGEF33A8MVX0 844 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 CXorf49A8MYA2 514 aaPredicted RBP4.68□□□□□ -1.66
VPS41-205ENST00000414632 TMEM233B4DJY2 109 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 B4E171 279 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 E7ESA3 106 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 PYCARD-AS1I3L0S3 204 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 RASGRF2O14827 1237 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 POLR1CO15160 346 aaPredicted RBP4.68□□□□□ -1.66
VPS41-205ENST00000414632 HCRTR1O43613 425 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 RAD1O60671 282 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 VPS26AO75436 327 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 FAM155BO75949 473 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 KIAA0754O94854 1291 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 SLCO2B1O94956 709 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 C1orf105O95561 183 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 TTC4O95801 387 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 AGR2O95994 175 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 CHRM5P08912 532 aaPredicted RBP4.68□□□□□ -1.66
VPS41-205ENST00000414632 ANKRD34CP0C6C1 535 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 LIPCP11150 499 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 UGT2B7P16662 529 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 NELFEP18615 380 aaKnown RBP4.68□□□□□ -1.66
VPS41-205ENST00000414632 WT1P19544 449 aaPredicted RBP4.68□□□□□ -1.66
VPS41-205ENST00000414632 PRDX3P30048 256 aaKnown RBP4.68□□□□□ -1.66
VPS41-205ENST00000414632 PKLRP30613 574 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 SHMT2P34897 504 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 TSPAN7P41732 249 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 GZMKP49863 264 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 CYP4F2P78329 520 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 TIAL1Q01085 375 aaKnown RBP eCLIP4.68□□□□□ -1.66
VPS41-205ENST00000414632 MC2RQ01718 297 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 TLE3Q04726 772 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 HGFACQ04756 655 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 TUBB3Q13509 450 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 FASTKQ14296 549 aaKnown RBP4.68□□□□□ -1.66
VPS41-205ENST00000414632 EFTUD2Q15029 972 aaKnown RBP eCLIP4.68□□□□□ -1.663e-6■■■□□ 18.3
VPS41-205ENST00000414632 TBR1Q16650 682 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 KYNUQ16719 465 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.68□□□□□ -1.66
VPS41-205ENST00000414632 DCAF12Q5T6F0 453 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 TEDDM1Q5T9Z0 273 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 ARHGAP40Q5TG30 622 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 HECTD2Q5U5R9 776 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 PRAMEF17Q5VTA0 474 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 KIAA1614Q5VZ46 1190 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 STEAP4Q687X5 459 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 SPESP1Q6UW49 350 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 SUSD1Q6UWL2 747 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 UNC5DQ6UXZ4 953 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 CEACAM20Q6UY09 585 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 MBOAT1Q6ZNC8 495 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 SEM1Q6ZVN7 128 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 TIPARPQ7Z3E1 657 aaKnown RBP4.68□□□□□ -1.66
VPS41-205ENST00000414632 DCUN1D3Q8IWE4 304 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 PALM2Q8IXS6 379 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 SLC15A4Q8N697 577 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms