RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 MMACHCQ9Y4U1 282 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 TRBV11-1A0A0K0K1C0 115 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 PINLYPA6NC86 204 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 A8MUA0 341 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 TGFBR3LH3BV60 316 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 CDC40O60508 579 aaKnown RBP eCLIP11.32□□□□□ -0.6
LIMS2-210ENST00000413578 IST1P53990 364 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 CDKN2DP55273 166 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 AP1S2P56377 157 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 RAB8AP61006 207 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 RBM20Q5T481 1227 aaKnown RBP11.32□□□□□ -0.6
LIMS2-210ENST00000413578 ACAD11Q709F0 780 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 CA13Q8N1Q1 262 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 MYO1HQ8N1T3 1032 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 PSD4Q8NDX1 1056 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 CREB3L4Q8TEY5 395 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 SLC5A11Q8WWX8 675 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 NINJ1Q92982 152 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 FBXL8Q96CD0 374 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 LINGO1Q96FE5 620 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 ZNF559Q9BR84 538 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 KLHL31Q9H511 634 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 TAS2R13Q9NYV9 303 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 FAM215AQ9Y5M1 114 aa11.32□□□□□ -0.6
LIMS2-210ENST00000413578 PRRC2AP48634 2157 aaKnown RBP11.32□□□□□ -0.6
LIMS2-210ENST00000413578 AKAP6Q13023 2319 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 USP27XA6NNY8 438 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 GOLGA8MH3BSY2 632 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 PDE9AO76083 593 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 MYO1DO94832 1006 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 GLSO94925 669 aaPredicted RBP11.31□□□□□ -0.6
LIMS2-210ENST00000413578 IGHG3P01860 377 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 KRT14P02533 472 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 TUBB4AP04350 444 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 SERPIND1P05546 499 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 SERPINA6P08185 405 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 HIST1H2AGP0C0S8 130 aaPredicted RBP11.31□□□□□ -0.6
LIMS2-210ENST00000413578 CD99P14209 185 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 HIST1H2ADP20671 130 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 SSR4P51571 173 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 DLX5P56178 289 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 PMPCAQ10713 525 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 GXYLT1Q4G148 440 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 RTL6Q6ICC9 239 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 ZNF662Q6ZS27 426 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 TMEM200AQ86VY9 491 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 CNTN4Q8IWV2 1026 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 GPALPP1Q8IXQ4 340 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 PALM2Q8IXS6 379 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 TMEM156Q8N614 296 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 NAT8LQ8N9F0 302 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.31□□□□□ -0.6
LIMS2-210ENST00000413578 ARMC2Q8NEN0 867 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 TRPV3Q8NET8 790 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 NCLNQ969V3 563 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 VMP1Q96GC9 406 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 PDLIM2Q96JY6 352 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 HIST1H2AHQ96KK5 128 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 HIST1H2AJQ99878 128 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 H2AFJQ9BTM1 129 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 DEFB127Q9H1M4 99 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 PELI2Q9HAT8 420 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 SLC24A3Q9HC58 644 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 TIMMDC1Q9NPL8 285 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 IARS2Q9NSE4 1012 aaKnown RBP11.31□□□□□ -0.6
LIMS2-210ENST00000413578 ARL15Q9NXU5 204 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 IKZF3Q9UKT9 509 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 YARS2Q9Y2Z4 477 aaKnown RBP11.31□□□□□ -0.6
LIMS2-210ENST00000413578 L3MBTL1Q9Y468 752 aa11.31□□□□□ -0.6
LIMS2-210ENST00000413578 ABCA4P78363 2273 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 HCFC1P51610 2035 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 A0A0G2JMM0 328 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 A0A1B0GVC2 190 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 A0A1W2PPB8 328 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 A0A1W2PRS3 328 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 URADA6NGE7 173 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 KIR3DP1A8MWS1 328 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 PSMD12O00232 456 aaPredicted RBP11.3□□□□□ -0.6
LIMS2-210ENST00000413578 CTAG2O75638 210 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 AHSGP02765 367 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 PPP2R1BP30154 601 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 HNF4AP41235 474 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 HNRNPFP52597 415 aaKnown RBP11.3□□□□□ -0.6
LIMS2-210ENST00000413578 PGGT1BP53609 377 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 PPIAP62937 165 aaKnown RBP11.3□□□□□ -0.6
LIMS2-210ENST00000413578 CSHL1Q14406 222 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 CRYMQ14894 314 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 PPP1R3AQ16821 1122 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 BBS9Q3SYG4 887 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 XKR6Q5GH73 641 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 CES4AQ5XG92 561 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 SBSNQ6UWP8 590 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 C16orf47Q6ZP98 133 aaPredicted RBP11.3□□□□□ -0.6
LIMS2-210ENST00000413578 RGS9BPQ6ZS82 235 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 GALNT7Q86SF2 657 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 TGIF2LYQ8IUE0 185 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 TBC1D19Q8N5T2 526 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 TMEM52Q8NDY8 209 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 OR2M7Q8NG81 312 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 ATL1Q8WXF7 558 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms