RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 E7ESA3 106 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 C19orf84I3L1E1 186 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 FANCGO15287 622 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 NME2P1O60361 137 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 SLC25A12O75746 678 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 WDR47O94967 919 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 WISP3O95389 354 aaPredicted RBP17.96■□□□□ 0.47
CPSF7-204ENST00000413232 NME2P22392 152 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 PPP2R1BP30154 601 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 HNRNPH1P31943 449 aaKnown RBP17.96■□□□□ 0.47
CPSF7-204ENST00000413232 SLC6A12P48065 614 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 HNRNPFP52597 415 aaKnown RBP17.96■□□□□ 0.47
CPSF7-204ENST00000413232 SKP1P63208 163 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 BTN3A2P78410 334 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 CDKL1Q00532 357 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 FBXO48Q5FWF7 155 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 ADNP2Q6IQ32 1131 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 NIPAL1Q6NVV3 410 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 RPTNQ6XPR3 784 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 ARMC10Q8N2F6 343 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 SPATA6LQ8N4H0 392 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 NKAPQ8N5F7 415 aaKnown RBP17.96■□□□□ 0.47
CPSF7-204ENST00000413232 EGFL8Q99944 293 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 POLQO75417 2590 aa17.96■□□□□ 0.47
CPSF7-204ENST00000413232 TAPBPO15533 448 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 C1GALT1C1LP0DN25 315 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 RPL21P46778 160 aaKnown RBP17.95■□□□□ 0.46
CPSF7-204ENST00000413232 CYB561P49447 251 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 MTFR2Q6P444 385 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 XKRXQ6PP77 449 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 CAPN12Q6ZSI9 719 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 VN1R5Q7Z5H4 357 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 KLHDC8AQ8IYD2 350 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 HORMAD2Q8N7B1 307 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 ESAMQ96AP7 390 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 VPS39Q96JC1 886 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 MAGED4Q96JG8 741 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 PDLIM2Q96JY6 352 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 PHF12Q96QT6 1004 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 CAB39LQ9H9S4 337 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 CLK4Q9HAZ1 481 aaKnown RBP17.95■□□□□ 0.46
CPSF7-204ENST00000413232 CTNNAL1Q9UBT7 734 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 MTO1Q9Y2Z2 717 aaKnown RBP17.95■□□□□ 0.46
CPSF7-204ENST00000413232 MEMO1Q9Y316 297 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 SNX24Q9Y343 169 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 ASB1Q9Y576 335 aa17.95■□□□□ 0.46
CPSF7-204ENST00000413232 LRIT2A6NDA9 550 aa17.94■□□□□ 0.46
CPSF7-204ENST00000413232 URADA6NGE7 173 aa17.94■□□□□ 0.46
CPSF7-204ENST00000413232 NCF1BA6NI72 391 aaPredicted RBP17.94■□□□□ 0.46
CPSF7-204ENST00000413232 NCF1CA8MVU1 366 aaPredicted RBP17.94■□□□□ 0.46
CPSF7-204ENST00000413232 CXorf49A8MYA2 514 aaPredicted RBP17.94■□□□□ 0.46
CPSF7-204ENST00000413232 PSMD12O00232 456 aaPredicted RBP17.94■□□□□ 0.46
CPSF7-204ENST00000413232 ESRRAP11474 423 aaPredicted RBP17.94■□□□□ 0.46
CPSF7-204ENST00000413232 NCF1P14598 390 aaPredicted RBP17.94■□□□□ 0.46
CPSF7-204ENST00000413232 TRHRP34981 398 aaPredicted RBP17.94■□□□□ 0.46
CPSF7-204ENST00000413232 GMPRP36959 345 aa17.94■□□□□ 0.46
CPSF7-204ENST00000413232 HLCSP50747 726 aa17.94■□□□□ 0.46
CPSF7-204ENST00000413232 GPR143P51810 404 aa17.94■□□□□ 0.46
CPSF7-204ENST00000413232 CASP6P55212 293 aa17.94■□□□□ 0.46
CPSF7-204ENST00000413232 SLBPQ14493 270 aaKnown RBP eCLIP17.94■□□□□ 0.46
CPSF7-204ENST00000413232 C3P1Q6ZMU1 363 aa17.94■□□□□ 0.46
CPSF7-204ENST00000413232 C16orf47Q6ZP98 133 aaPredicted RBP17.94■□□□□ 0.46
CPSF7-204ENST00000413232 SCUBE1Q8IWY4 988 aa17.94■□□□□ 0.46
CPSF7-204ENST00000413232 MS4A6EQ96DS6 147 aa17.94■□□□□ 0.46
CPSF7-204ENST00000413232 QRFPRQ96P65 431 aa17.94■□□□□ 0.46
CPSF7-204ENST00000413232 TMEM79Q9BSE2 394 aa17.94■□□□□ 0.46
CPSF7-204ENST00000413232 RHOJQ9H4E5 214 aa17.94■□□□□ 0.46
CPSF7-204ENST00000413232 GPAMQ9HCL2 828 aa17.94■□□□□ 0.46
CPSF7-204ENST00000413232 INTS1Q8N201 2190 aaKnown RBP17.93■□□□□ 0.46
CPSF7-204ENST00000413232 TRBV11-1A0A0K0K1C0 115 aa17.93■□□□□ 0.46
CPSF7-204ENST00000413232 EFCAB8A8MWE9 144 aa17.93■□□□□ 0.46
CPSF7-204ENST00000413232 ADAM10O14672 748 aa17.93■□□□□ 0.46
CPSF7-204ENST00000413232 PRKNO60260 465 aaPredicted RBP17.93■□□□□ 0.46
CPSF7-204ENST00000413232 MYO1DO94832 1006 aa17.93■□□□□ 0.46
CPSF7-204ENST00000413232 GNAZP19086 355 aa17.93■□□□□ 0.46
CPSF7-204ENST00000413232 PTGER1P34995 402 aa17.93■□□□□ 0.46
CPSF7-204ENST00000413232 RFC3P40938 356 aa17.93■□□□□ 0.46
CPSF7-204ENST00000413232 HNMTP50135 292 aa17.93■□□□□ 0.46
CPSF7-204ENST00000413232 NR0B1P51843 470 aaKnown RBP17.93■□□□□ 0.46
CPSF7-204ENST00000413232 CBLBQ13191 982 aa17.93■□□□□ 0.46
CPSF7-204ENST00000413232 TGFBIQ15582 683 aa17.93■□□□□ 0.46
CPSF7-204ENST00000413232 TMIGD1Q6UXZ0 262 aa17.93■□□□□ 0.46
CPSF7-204ENST00000413232 DOLPP1Q86YN1 238 aa17.93■□□□□ 0.46
CPSF7-204ENST00000413232 ZNF295-AS1Q8N0V1 137 aa17.93■□□□□ 0.46
CPSF7-204ENST00000413232 B3GNT7Q8NFL0 401 aa17.93■□□□□ 0.46
CPSF7-204ENST00000413232 AGAP11Q8TF27 550 aa17.93■□□□□ 0.46
CPSF7-204ENST00000413232 GAL3ST3Q96A11 431 aa17.93■□□□□ 0.46
CPSF7-204ENST00000413232 DEFB126Q9BYW3 111 aa17.93■□□□□ 0.46
CPSF7-204ENST00000413232 LIN28AQ9H9Z2 209 aaKnown RBP17.93■□□□□ 0.46
CPSF7-204ENST00000413232 PNO1Q9NRX1 252 aaKnown RBP17.93■□□□□ 0.46
CPSF7-204ENST00000413232 ZNF490Q9ULM2 529 aaPredicted RBP17.93■□□□□ 0.46
CPSF7-204ENST00000413232 HCFC1P51610 2035 aa17.93■□□□□ 0.46
CPSF7-204ENST00000413232 MYOCOSA0A1B0GUC4 107 aa17.92■□□□□ 0.46
CPSF7-204ENST00000413232 ERI3O43414 337 aaKnown RBP17.92■□□□□ 0.46
CPSF7-204ENST00000413232 ZNF24P17028 368 aa17.92■□□□□ 0.46
CPSF7-204ENST00000413232 SSTR1P30872 391 aa17.92■□□□□ 0.46
CPSF7-204ENST00000413232 KIR3DL1P43629 444 aa17.92■□□□□ 0.46
CPSF7-204ENST00000413232 GNG11P61952 73 aa17.92■□□□□ 0.46
CPSF7-204ENST00000413232 NAA30Q147X3 362 aaPredicted RBP17.92■□□□□ 0.46
CPSF7-204ENST00000413232 MDGA2Q7Z553 956 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms