RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 CSH2P0DML3 217 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 SPRP35270 261 aaPredicted RBP0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 ID1P41134 155 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 TNFRSF4P43489 277 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 ASCL1P50553 236 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 CRYBA2P53672 197 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 EIF5P55010 431 aaKnown RBP0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 TLE4Q04727 773 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 CACNG1Q06432 222 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 ACSM1Q08AH1 577 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 ILF2Q12905 390 aaKnown RBP0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 BAATQ14032 418 aaPredicted RBP0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 TAZQ16635 292 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 ECSCRQ19T08 205 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 LBHQ53QV2 105 aaPredicted RBP0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 ALFQ53S48 1182 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 FGD3Q5JSP0 725 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 FAM205BPQ63HN1 556 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 PRSS55Q6UWB4 352 aaPredicted RBP0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 NUFIP2Q7Z417 695 aaKnown RBP0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 COX8CQ7Z4L0 72 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 FAM219AQ8IW50 185 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 CCDC60Q8IWA6 550 aaPredicted RBP0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 SLC22A18ASQ8N1D0 253 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZNF561Q8N587 486 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 Q8N9L7 120 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZNF671Q8TAW3 534 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 SEPT1Q8WYJ6 367 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 SMPDL3AQ92484 453 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 IL22RA2Q969J5 263 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 PYCR2Q96C36 320 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 LURAP1Q96LR2 239 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 GDAP1L1Q96MZ0 367 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 SPATA33Q96N06 139 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 PAXXQ9BUH6 204 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 KRTAP4-1Q9BYQ7 146 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 PANK2Q9BZ23 570 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZBP1Q9H171 429 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 PNNQ9H307 717 aaKnown RBP0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 UNC45AQ9H3U1 944 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 C5orf66Q9H5L9 145 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 RNF121Q9H920 327 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 NTN4Q9HB63 628 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 MRGBPQ9NV56 204 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 MGAT4AQ9UM21 535 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 SATB2Q9UPW6 733 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 COLEC10Q9Y6Z7 277 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 IL16Q14005 1332 aa0.84□□□□□ -2.28
RNU2-55P-201ENST00000411146 RNF123Q5XPI4 1314 aa0.84□□□□□ -2.28
RNU2-55P-201ENST00000411146 LOC100509620A0A075B734 347 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 IQCMA0A1B0GVH7 501 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 FRG2CA6NGY1 282 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 FOXI3A8MTJ6 420 aaPredicted RBP0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 B4DXG7 233 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 PRSS46E5RG02 174 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 E5RGE8 158 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 IPO8O15397 1037 aaKnown RBP0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 EPB41L2O43491 1005 aaKnown RBP0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 LATO43561 262 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 YES1P07947 543 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 SLC35E2P0CK97 266 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 DLATP10515 647 aaKnown RBP0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 EEF2P13639 858 aaKnown RBP0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 CAPN3P20807 821 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 MC5RP33032 325 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 EFNA3P52797 238 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 NDST1P52848 882 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 CLDN17P56750 224 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 ZNF33BQ06732 778 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 EBI3Q14213 229 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 GCKRQ14397 625 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 KIAA0040Q15053 153 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 LETM2Q2VYF4 491 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 ZNF658BQ4V348 819 aaPredicted RBP0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 C1orf122Q6ZSJ8 110 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 PRUNE1Q86TP1 453 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 TGIF2LYQ8IUE0 185 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 TC2NQ8N9U0 490 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 CCDC63Q8NA47 563 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 XXYLT1Q8NBI6 393 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 PCNPQ8WW12 178 aaKnown RBP0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 PRPF31Q8WWY3 499 aaKnown RBP0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 LIPHQ8WWY8 451 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 SLCO4A1Q96BD0 722 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 RAB3CQ96E17 227 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 PGM2Q96G03 612 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 ALKBH7Q9BT30 221 aaPredicted RBP0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 MXD3Q9BW11 206 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 CCDC106Q9BWC9 280 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 SYNCQ9H7C4 482 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 GIMAP4Q9NUV9 329 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 HAUS2Q9NVX0 235 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 PKD2L2Q9NZM6 624 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 KLK12Q9UKR0 248 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 NSG2Q9Y328 171 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 SH3GLB1Q9Y371 365 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 RLFQ13129 1914 aa0.83□□□□□ -2.28
RNU2-55P-201ENST00000411146 IGHV3-35A0A0C4DH35 117 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms