RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ZFR2Q9UPR6 939 aaKnown RBP12.98□□□□□ -0.33
LIMS1-205ENST00000410093 EXO1Q9UQ84 846 aaKnown RBP12.98□□□□□ -0.33
LIMS1-205ENST00000410093 SH2B3Q9UQQ2 575 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.98□□□□□ -0.33
LIMS1-205ENST00000410093 COLEC10Q9Y6Z7 277 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 TICRRQ7Z2Z1 1910 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 A0A1W2PQU0 124 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 A0A1W2PRB8 838 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 TRBC2A0A5B9 178 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 MRPS14O60783 128 aaKnown RBP12.98□□□□□ -0.33
LIMS1-205ENST00000410093 RNGTTO60942 597 aaKnown RBP12.98□□□□□ -0.33
LIMS1-205ENST00000410093 TNFRSF21O75509 655 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 PAK4O96013 591 aaPredicted RBP12.98□□□□□ -0.33
LIMS1-205ENST00000410093 DRD2P14416 443 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 TSFMP43897 325 aaKnown RBP12.98□□□□□ -0.33
LIMS1-205ENST00000410093 TPD52P55327 224 aaPredicted RBP12.98□□□□□ -0.33
LIMS1-205ENST00000410093 KIAA1024LP59773 190 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 SELENOWP63302 87 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 SLC14A1Q13336 389 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 TUBA3CQ13748 450 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 C2orf27AQ580R0 203 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 WASH2PQ6VEQ5 465 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 ZNF551Q7Z340 670 aaPredicted RBP12.98□□□□□ -0.33
LIMS1-205ENST00000410093 C10orf111Q8N326 155 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 FBXL6Q8N531 539 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 SRFBP1Q8NEF9 429 aaKnown RBP12.98□□□□□ -0.33
LIMS1-205ENST00000410093 GANCQ8TET4 914 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 FBXL20Q96IG2 436 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 CAMK1GQ96NX5 476 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 FERD3LQ96RJ6 166 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 PRRX2Q99811 253 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 APOOQ9BUR5 198 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 SARGQ9BW04 601 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 NLNQ9BYT8 704 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 TOR3AQ9H497 397 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 MBNL1Q9NR56 388 aaKnown RBP12.98□□□□□ -0.33
LIMS1-205ENST00000410093 TMEM184CQ9NVA4 438 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 TAS2R7Q9NYW3 318 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 EHD3Q9NZN3 535 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 CIDEBQ9UHD4 219 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 PCDHGB3Q9Y5G1 929 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 PCDHGA2Q9Y5H1 932 aa12.98□□□□□ -0.33
LIMS1-205ENST00000410093 LOC100130705A0A1B0GUX0 176 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 CCDC160A6NGH7 325 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 ENO4A6NNW6 628 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 ANHXE9PGG2 379 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 ADAMDEC1O15204 470 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 YY2O15391 372 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 CEACAM5P06731 702 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 JUNBP17275 347 aaPredicted RBP12.97□□□□□ -0.33
LIMS1-205ENST00000410093 TPP2P29144 1249 aaPredicted RBP12.97□□□□□ -0.33
LIMS1-205ENST00000410093 PKLRP30613 574 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 TIE1P35590 1138 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 AHRP35869 848 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 PEX19P40855 299 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 PRIM2P49643 509 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 MAPK12P53778 367 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 CXCR4P61073 352 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 HBA1P69905 142 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 SPIDRQ14159 915 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 KRT33BQ14525 404 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 UAP1L1Q3KQV9 507 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 CRB2Q5IJ48 1285 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 BROXQ5VW32 411 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 ADNP2Q6IQ32 1131 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 ZNF773Q6PK81 442 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 VN1R5Q7Z5H4 357 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 DCP2Q8IU60 420 aaKnown RBP12.97□□□□□ -0.33
LIMS1-205ENST00000410093 OR14C36Q8NHC7 312 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 WDR48Q8TAF3 677 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 MSANTD3Q96H12 275 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 HSH2DQ96JZ2 352 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 C12orf66Q96MD2 445 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 MUS81Q96NY9 551 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 KIR3DX1Q9H7L2 352 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 DDX31Q9H8H2 851 aaKnown RBP12.97□□□□□ -0.33
LIMS1-205ENST00000410093 ACSS1Q9NUB1 689 aaPredicted RBP12.97□□□□□ -0.33
LIMS1-205ENST00000410093 TMEM9Q9P0T7 183 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 ENOPH1Q9UHY7 261 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 ANGPT4Q9Y264 503 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 CEPT1Q9Y6K0 416 aa12.97□□□□□ -0.33
LIMS1-205ENST00000410093 A0A1W2PPV9 198 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 HS6ST1O60243 411 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 JRKO75564 520 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 C9P02748 559 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 CCDC159P0C7I6 412 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 IGFBP5P24593 272 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 BSGP35613 385 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 CHI3L1P36222 383 aaPredicted RBP12.96□□□□□ -0.33
LIMS1-205ENST00000410093 FRKP42685 505 aaPredicted RBP12.96□□□□□ -0.33
LIMS1-205ENST00000410093 CRATP43155 626 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 ADPRHP54922 357 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 CSNK2BP67870 215 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 ZNF691Q5VV52 312 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 CHST15Q7LFX5 561 aaPredicted RBP12.96□□□□□ -0.33
LIMS1-205ENST00000410093 ERI1Q8IV48 349 aaKnown RBP12.96□□□□□ -0.33
LIMS1-205ENST00000410093 PIK3C3Q8NEB9 887 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 ZNF566Q969W8 418 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 ZBED6CLQ96FA7 236 aaPredicted RBP12.96□□□□□ -0.33
LIMS1-205ENST00000410093 IL17FQ96PD4 163 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms