RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 ZNF555Q8NEP9 628 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 ZFAND2BQ8WV99 257 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 TM4SF18Q96CE8 201 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 BARD1Q99728 777 aaKnown RBP19.22■□□□□ 0.67
USP39-204ENST00000409766 LHX9Q9NQ69 397 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 C1GALT1Q9NS00 363 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 MOSPD1Q9UJG1 213 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 WBP11Q9Y2W2 641 aaKnown RBP19.22■□□□□ 0.67
USP39-204ENST00000409766 GPSM3Q9Y4H4 160 aa19.22■□□□□ 0.67
USP39-204ENST00000409766 OR52A4PA6NMU1 304 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 SLC31A1O15431 190 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 CAPN5O15484 640 aaPredicted RBP19.21■□□□□ 0.67
USP39-204ENST00000409766 LCMT2O60294 686 aaKnown RBP19.21■□□□□ 0.67
USP39-204ENST00000409766 DIRAS1O95057 198 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 DDCP20711 480 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 AQP1P29972 269 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 PKLRP30613 574 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 CASP9P55211 416 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 PPP2CBP62714 309 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 PPP2CAP67775 309 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 KCNJ10P78508 379 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 FADDQ13158 208 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 SLC5A12Q1EHB4 618 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 UAP1L1Q3KQV9 507 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 ZC3H12BQ5HYM0 836 aaKnown RBP19.21■□□□□ 0.67
USP39-204ENST00000409766 EP400NLQ6ZTU2 488 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 TMEM26Q6ZUK4 368 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 PAGE2Q7Z2X7 111 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 OR2L8Q8NGY9 312 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 TPD52L3Q96J77 140 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 C7orf34Q96L11 122 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 MYOCQ99972 504 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 ADPRHL2Q9NX46 363 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 PTTG2Q9NZH5 202 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 ACSL6Q9UKU0 697 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 BAG5Q9UL15 447 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 SCML1Q9UN30 329 aa19.21■□□□□ 0.67
USP39-204ENST00000409766 CACNB4O00305 520 aaPredicted RBP19.2■□□□□ 0.66
USP39-204ENST00000409766 SUV39H1O43463 412 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 OR1F1O43749 312 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 DNAJA1P31689 397 aaKnown RBP19.2■□□□□ 0.66
USP39-204ENST00000409766 HLCSP50747 726 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 RBBP4Q09028 425 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 LSAMPQ13449 338 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 RFX4Q33E94 735 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 B3GNT6Q6ZMB0 384 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 RAB11FIP5Q9BXF6 653 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 ING2Q9H160 280 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 TMEM38AQ9H6F2 299 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 THEGQ9P2T0 379 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 PCDHGA8Q9Y5G5 932 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 TBX19O60806 448 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 LTBRP36941 435 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 YAP1P46937 504 aaKnown RBP19.2■□□□□ 0.66
USP39-204ENST00000409766 RAD23AP54725 363 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 ITGA1P56199 1179 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 GCNT6Q5T4J0 391 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 TRIM40Q6P9F5 258 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 CYP4Z1Q86W10 505 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 OR5AK3PQ8NH89 298 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 DOHHQ9BU89 302 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 MVB12BQ9H7P6 319 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 FGF22Q9HCT0 170 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 PRDM8Q9NQV8 689 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 CLDND1Q9NY35 253 aa19.2■□□□□ 0.66
USP39-204ENST00000409766 EYSQ5T1H1 3165 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 LOC100130705A0A1B0GUX0 176 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 MYO1GB0I1T2 1018 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 SLC16A6O15403 523 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 DPM1O60762 260 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 FPR1P21462 350 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 CHI3L1P36222 383 aaPredicted RBP19.19■□□□□ 0.66
USP39-204ENST00000409766 ARHGDIAP52565 204 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 SELENOWP63302 87 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 EEF1A2Q05639 463 aaKnown RBP19.19■□□□□ 0.66
USP39-204ENST00000409766 KRT33BQ14525 404 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 LAPTM4AQ15012 233 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 UBE3DQ7Z6J8 389 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 RNF130Q86XS8 419 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 PLD3Q8IV08 490 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 OR52E1Q8NGJ3 308 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 ASB12Q8WXK4 309 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 RGMAQ96B86 450 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 NRBF2Q96F24 287 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 SIPA1Q96FS4 1042 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 QRFPRQ96P65 431 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 NPLQ9BXD5 320 aaPredicted RBP19.19■□□□□ 0.66
USP39-204ENST00000409766 DDX18Q9NVP1 670 aaKnown RBP19.19■□□□□ 0.66
USP39-204ENST00000409766 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.19■□□□□ 0.66
USP39-204ENST00000409766 ORC6Q9Y5N6 252 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 MYO10Q9HD67 2058 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 COL4A2P08572 1712 aa19.19■□□□□ 0.66
USP39-204ENST00000409766 POM121BA6NF01 834 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 PDZK1P1A8MUH7 402 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 NDUFS4O43181 175 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 ROR2Q01974 943 aaKnown RBP19.18■□□□□ 0.66
USP39-204ENST00000409766 HEPACAMQ14CZ8 416 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 RPE65Q16518 533 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 FAM180BQ6P0A1 224 aa19.18■□□□□ 0.66
USP39-204ENST00000409766 ALDH16A1Q8IZ83 802 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms