RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 IL36AQ9UHA7 158 aa12.86□□□□□ -0.35
COL6A2-204ENST00000409416 RPS6KA6Q9UK32 745 aa12.86□□□□□ -0.35
COL6A2-204ENST00000409416 SNX11Q9Y5W9 270 aa12.86□□□□□ -0.35
COL6A2-204ENST00000409416 FNDC1Q4ZHG4 1894 aaPredicted RBP12.86□□□□□ -0.35
COL6A2-204ENST00000409416 VWA8A3KMH1 1905 aa12.86□□□□□ -0.35
COL6A2-204ENST00000409416 PSMD11O00231 422 aa12.86□□□□□ -0.35
COL6A2-204ENST00000409416 GNB5O14775 395 aa12.86□□□□□ -0.35
COL6A2-204ENST00000409416 WNT9AO14904 365 aa12.86□□□□□ -0.35
COL6A2-204ENST00000409416 PRPS2P11908 318 aa12.86□□□□□ -0.35
COL6A2-204ENST00000409416 BUD31P41223 144 aaPredicted RBP12.86□□□□□ -0.35
COL6A2-204ENST00000409416 ARPC4P59998 168 aa12.86□□□□□ -0.35
COL6A2-204ENST00000409416 LEXMQ3ZCV2 418 aa12.86□□□□□ -0.35
COL6A2-204ENST00000409416 COX20Q5RI15 118 aa12.86□□□□□ -0.35
COL6A2-204ENST00000409416 TRIM46Q7Z4K8 759 aa12.86□□□□□ -0.35
COL6A2-204ENST00000409416 FKBP10Q96AY3 582 aa12.86□□□□□ -0.35
COL6A2-204ENST00000409416 LGALS12Q96DT0 336 aa12.86□□□□□ -0.35
COL6A2-204ENST00000409416 VPS35Q96QK1 796 aa12.86□□□□□ -0.35
COL6A2-204ENST00000409416 NTMT1Q9BV86 223 aa12.86□□□□□ -0.35
COL6A2-204ENST00000409416 IGLON5A6NGN9 336 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 ISM1B1AKI9 464 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 EIF3FO00303 357 aaPredicted RBP12.85□□□□□ -0.35
COL6A2-204ENST00000409416 AIREO43918 545 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 PRAMEF4O60810 478 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 SERPINB7O75635 380 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 CA3P07451 260 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 ITIH1P19827 911 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 GTF2E2P29084 291 aaKnown RBP12.85□□□□□ -0.35
COL6A2-204ENST00000409416 TPTEP56180 551 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 GABARAPL2P60520 117 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 DUOXA1Q1HG43 343 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 ZNF750Q32MQ0 723 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 PRAMEF9Q5VWM5 478 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 PARS2Q7L3T8 475 aaKnown RBP12.85□□□□□ -0.35
COL6A2-204ENST00000409416 ANKRD13BQ86YJ7 626 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 OR4N5Q8IXE1 308 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 TMEFF1Q8IYR6 380 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 SVOPQ8N4V2 548 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 FCRL4Q96PJ5 515 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 SLC35A5Q9BS91 424 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 RBCK1Q9BYM8 510 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 DCSTAMPQ9H295 470 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 TRIT1Q9H3H1 467 aaKnown RBP12.85□□□□□ -0.35
COL6A2-204ENST00000409416 RNF167Q9H6Y7 350 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 ZNF556Q9HAH1 456 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 CLCA2Q9UQC9 943 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 CACNA1GO43497 2377 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 TRPM7Q96QT4 1865 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 A0A1W2PP55 124 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 GRXCR2A6NFK2 248 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 STK25O00506 426 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 OR10H3O60404 316 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 ABLIM3O94929 683 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 NKX2-5P52952 324 aaPredicted RBP12.85□□□□□ -0.35
COL6A2-204ENST00000409416 CLEC12AQ5QGZ9 265 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 TMEM145Q8NBT3 493 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 PJA1Q8NG27 643 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 CXorf40AQ8TE69 158 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 TTLL2Q9BWV7 592 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 SPNS1Q9H2V7 528 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 SIRT5Q9NXA8 310 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 DPP7Q9UHL4 492 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 ASXL3Q9C0F0 2248 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 CHD5Q8TDI0 1954 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 VPS13AQ96RL7 3174 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 H3BSH0 61 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 PITPNM1O00562 1244 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 SLC22A1O15245 554 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 BCHEP06276 602 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 CCDC159P0C7I6 412 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 FPR1P21462 350 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 AOAHP28039 575 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 DHCR24Q15392 516 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 KIAA1614Q5VZ46 1190 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 PLA2G15Q8NCC3 412 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 C17orf62Q9BQA9 187 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 QRSL1Q9H0R6 528 aaKnown RBP12.85□□□□□ -0.35
COL6A2-204ENST00000409416 TM9SF3Q9HD45 589 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 IL1RAPQ9NPH3 570 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 ADPRHL2Q9NX46 363 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 BACE2Q9Y5Z0 518 aa12.85□□□□□ -0.35
COL6A2-204ENST00000409416 TANC1Q9C0D5 1861 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 PRRT4C9JH25 899 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 FZD6O60353 706 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 CKMT1AP12532 417 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 PCMT1P22061 227 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 CTSKP43235 329 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 IFITM3Q01628 133 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 HYAL2Q12891 473 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 FXNQ16595 210 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 KIAA1324Q6UXG2 1013 aaKnown RBP12.84□□□□□ -0.35
COL6A2-204ENST00000409416 GPR65Q8IYL9 337 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 FIBINQ8TAL6 211 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 USP7Q93009 1102 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 SLC29A3Q9BZD2 475 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 CEP44Q9C0F1 390 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 ELAC1Q9H777 363 aaKnown RBP12.84□□□□□ -0.35
COL6A2-204ENST00000409416 RAD18Q9NS91 495 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 CEP250Q9BV73 2442 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 TNFRSF11BO00300 401 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 DNTTP04053 509 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms