RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 GALNT10Q86SR1 603 aa23.53■■□□□ 1.36
DNMT3A-206ENST00000406659 NATD1Q8N6N6 113 aa23.53■■□□□ 1.36
DNMT3A-206ENST00000406659 FLCNQ8NFG4 579 aa23.53■■□□□ 1.36
DNMT3A-206ENST00000406659 OR2L3Q8NG85 312 aa23.53■■□□□ 1.36
DNMT3A-206ENST00000406659 LCN9Q8WX39 176 aa23.53■■□□□ 1.36
DNMT3A-206ENST00000406659 JPH3Q8WXH2 748 aaPredicted RBP23.53■■□□□ 1.36
DNMT3A-206ENST00000406659 MSANTD3Q96H12 275 aa23.53■■□□□ 1.36
DNMT3A-206ENST00000406659 RAD21L1Q9H4I0 556 aa23.53■■□□□ 1.36
DNMT3A-206ENST00000406659 RAPGEFL1Q9UHV5 662 aa23.53■■□□□ 1.36
DNMT3A-206ENST00000406659 NDRG2Q9UN36 371 aaKnown RBP23.53■■□□□ 1.36
DNMT3A-206ENST00000406659 SZT2Q5T011 3432 aa23.53■■□□□ 1.36
DNMT3A-206ENST00000406659 H3BNH8 94 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 MAP3K13O43283 966 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 TBX19O60806 448 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 EML2O95834 649 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 THRBP10828 461 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 ATP6V1B1P15313 513 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 SHMT2P34897 504 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 SOAT1P35610 550 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 BCL6P41182 706 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 MAGEA2P43356 314 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 YPEL5P62699 121 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 TEAD4Q15561 434 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 COX20Q5RI15 118 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 OR4C11Q6IEV9 310 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 UBE3DQ7Z6J8 389 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 TMEM145Q8NBT3 493 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 FBXL20Q96IG2 436 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 DPH7Q9BTV6 452 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 LHX9Q9NQ69 397 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 SPHK1Q9NYA1 384 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 BAG5Q9UL15 447 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 HEATR5BQ9P2D3 2071 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 ISM1B1AKI9 464 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 H0YAE9 185 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 FKBP9O95302 570 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 KRT75O95678 551 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 ETFAP13804 333 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 PEBP1P30086 187 aaKnown RBP23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 ACTR1BP42025 376 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 SRP54P61011 504 aaKnown RBP23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 ACTR1AP61163 376 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 ADARB1P78563 741 aaKnown RBP23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 TMEM35AQ53FP2 167 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 GCNT6Q5T4J0 391 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 TRIM40Q6P9F5 258 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 TTC33Q6PID6 262 aaPredicted RBP23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 SLC30A9Q6PML9 568 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 SPESP1Q6UW49 350 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 AMIGO1Q86WK6 493 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 TSPAN14Q8NG11 270 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 OR4E2Q8NGC2 313 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 MAL2Q969L2 176 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 TMEM168Q9H0V1 697 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 IL1RAPQ9NPH3 570 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 EBF1Q9UH73 591 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 HS3ST3A1Q9Y663 406 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 AP1M2Q9Y6Q5 423 aa23.52■■□□□ 1.36
DNMT3A-206ENST00000406659 UNC80Q8N2C7 3258 aa23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 LRIT2A6NDA9 550 aa23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 SHISA7A6NL88 538 aa23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 HAT1O14929 419 aa23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 MVDP53602 400 aa23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 PLA2G16P53816 162 aa23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 FADDQ13158 208 aa23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 ZIK1Q3SY52 487 aaPredicted RBP23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 OR5AK3PQ8NH89 298 aa23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 CCL4L1Q8NHW4 92 aa23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 HSH2DQ96JZ2 352 aa23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 RBM4BQ9BQ04 359 aaKnown RBP23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 RBM4Q9BWF3 364 aaKnown RBP23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 YIPF3Q9GZM5 350 aa23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 DDX31Q9H8H2 851 aaKnown RBP23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 SMURF2Q9HAU4 748 aa23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 CLK4Q9HAZ1 481 aaKnown RBP23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 POLMQ9NP87 494 aaPredicted RBP23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 ADPRHL2Q9NX46 363 aa23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 OR6C2Q9NZP2 312 aa23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 ACSL6Q9UKU0 697 aa23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 PCOLCE2Q9UKZ9 415 aa23.51■■□□□ 1.35
DNMT3A-206ENST00000406659 PDPK1O15530 556 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 MBTPS2O43462 519 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 FABP3P05413 133 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 UQCRC2P22695 453 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 GSTM2P28161 218 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 DCTP40126 519 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 SSR2P43308 183 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 PRIM2P49643 509 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 CASP9P55211 416 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 SMAD4Q13485 552 aaKnown RBP23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 BIRC2Q13490 618 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 APOFQ13790 326 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 ZIC1Q15915 447 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 HIPK1Q86Z02 1210 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 FBXL6Q8N531 539 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 OR5P2Q8WZ92 322 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 RDH12Q96NR8 316 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 OSBPL10Q9BXB5 764 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 GPATCH2Q9NW75 528 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 USE1Q9NZ43 259 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms