RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 HIST2H2AA3Q6FI13 130 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 ADNP2Q6IQ32 1131 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 UNC5DQ6UXZ4 953 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 ZNF852Q6ZMS4 543 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 TMPRSS11BQ86T26 416 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 LAS2Q8IYD9 372 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 RASGEF1AQ8N9B8 481 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 POC5Q8NA72 575 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 OR4K1Q8NGD4 311 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 NFKBIDQ8NI38 313 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 GLYATL1Q969I3 302 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 PPCDCQ96CD2 204 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 TXNDC15Q96J42 360 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 POLE4Q9NR33 117 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 ACER3Q9NUN7 267 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 FAM8A1Q9UBU6 413 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 ANGPT4Q9Y264 503 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 DENND4CQ5VZ89 1909 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 BRCA2P51587 3418 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 PLXNA2O75051 1894 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 TBX1O43435 398 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 TLL1O43897 1013 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 CCNB2O95067 398 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 PTHP01270 115 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 RHCEP18577 417 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 LAG3P18627 525 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 TNFRSF1BP20333 461 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 SOX6P35712 828 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 PREPP48147 710 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 ALDH9A1P49189 494 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 NUDT6P53370 316 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 CTSCP53634 463 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 UGT2B15P54855 530 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 PCBP3P57721 371 aaKnown RBP10.29□□□□□ -0.76
CLIP4-204ENST00000404424 TMEM115Q12893 351 aaPredicted RBP10.29□□□□□ -0.76
CLIP4-204ENST00000404424 ZNF648Q5T619 568 aaPredicted RBP10.29□□□□□ -0.76
CLIP4-204ENST00000404424 ASTLQ6HA08 431 aaPredicted RBP10.29□□□□□ -0.76
CLIP4-204ENST00000404424 COMMD6Q7Z4G1 85 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 TECPR1Q7Z6L1 1165 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 SLC44A2Q8IWA5 706 aaPredicted RBP10.29□□□□□ -0.76
CLIP4-204ENST00000404424 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.29□□□□□ -0.76
CLIP4-204ENST00000404424 PARP16Q8N5Y8 322 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 EPHX3Q9H6B9 360 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 MYNNQ9NPC7 610 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 MS4A12Q9NXJ0 267 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 TAS2R9Q9NYW1 312 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 IFT52Q9Y366 437 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 DYRK1BQ9Y463 629 aa10.29□□□□□ -0.76
CLIP4-204ENST00000404424 LOC100506127A0A0U1RQW1 187 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 A0A1W2PRU2 124 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 PRAMEF25A6NGN4 478 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 HAT1O14929 419 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 PQBP1O60828 265 aaKnown RBP10.28□□□□□ -0.76
CLIP4-204ENST00000404424 LEFTY1O75610 366 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 GADD45GO95257 159 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 C1orf105O95561 183 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 C1GALT1C1LP0DN25 315 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 ARAFP10398 606 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 TIMP2P16035 220 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 GRK5P34947 590 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 CHI3L1P36222 383 aaPredicted RBP10.28□□□□□ -0.76
CLIP4-204ENST00000404424 C2orf80Q0P641 193 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 SLC13A2Q13183 592 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 PTGES3Q15185 160 aaKnown RBP10.28□□□□□ -0.76
CLIP4-204ENST00000404424 FAM71E1Q6IPT2 247 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 C19orf48Q6RUI8 117 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 TMEM25Q86YD3 366 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 SLAIN1Q8ND83 568 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 B3GNT7Q8NFL0 401 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 OR9Q2Q8NGE9 314 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 C16orf78Q8WTQ4 265 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 SLC35B4Q969S0 331 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 ZNF689Q96CS4 500 aaPredicted RBP10.28□□□□□ -0.76
CLIP4-204ENST00000404424 SLC46A2Q9BY10 475 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 OR51E2Q9H255 320 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 DMRT3Q9NQL9 472 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 SACM1LQ9NTJ5 587 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 ENPP4Q9Y6X5 453 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 ZAR1LA6NP61 321 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 NEDD8-MDP1E9PL57 170 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 H3BM21 787 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 GNRH1P01148 92 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 NPPBP16860 134 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 CBLP22681 906 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 XPAP23025 273 aaPredicted RBP10.28□□□□□ -0.76
CLIP4-204ENST00000404424 PIK3CBP42338 1070 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 TPTEP56180 551 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 TBPL1P62380 186 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 SELENBP1Q13228 472 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 SLBPQ14493 270 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLIP4-204ENST00000404424 TMEM220Q6QAJ8 160 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 FAM92BQ6ZTR7 304 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 DPPA4Q7L190 304 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 ARMCX6Q7L4S7 300 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 OTOP2Q7RTS6 562 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 SYTL1Q8IYJ3 562 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 METTL4Q8N3J2 472 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 LILRA3Q8N6C8 439 aaPredicted RBP10.28□□□□□ -0.76
CLIP4-204ENST00000404424 HCAR2Q8TDS4 363 aa10.28□□□□□ -0.76
CLIP4-204ENST00000404424 CHAC2Q8WUX2 184 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms