RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 SUPT3HO75486 399 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 WDPCPO95876 746 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 TBX6O95947 436 aaPredicted RBP13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 C2P06681 752 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 CD22P20273 847 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 OR4D2P58180 307 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 IRF8Q02556 426 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 ACTN3Q08043 901 aaPredicted RBP13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 BMPR2Q13873 1038 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 VN1R5Q7Z5H4 357 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 CA13Q8N1Q1 262 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 ST6GALNAC3Q8NDV1 305 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 CATSPER1Q8NEC5 780 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 OR2L5Q8NG80 312 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 OR1N1Q8NGS0 311 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 ADAMTS18Q8TE60 1221 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 GRHL3Q8TE85 626 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 KCTD4Q8WVF5 259 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 FAR1Q8WVX9 515 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 CCT6BQ92526 530 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 NXNL1Q96CM4 212 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 FAR2Q96K12 515 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 ZNF354BQ96LW1 612 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 PTCHD1Q96NR3 888 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 CDC42EP4Q9H3Q1 356 aaKnown RBP13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 PRDM9Q9NQV7 894 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 PLA2G3Q9NZ20 509 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 ZNF490Q9ULM2 529 aaPredicted RBP13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 MMACHCQ9Y4U1 282 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 ASB1Q9Y576 335 aa13.97□□□□□ -0.17
SMIM11A-203ENST00000399299 OR5H15A6NDH6 313 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 ANKUB1A6NFN9 424 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 K7EPI3 171 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 UBXN8O00124 270 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 CDK2AP1O14519 115 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 AGFG2O95081 481 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 KLHL2O95198 593 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 ALDOAP04075 364 aaKnown RBP13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 MYBL2P10244 700 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 MTHFD2P13995 350 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 ECHS1P30084 290 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 SERPINB8P50452 374 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 SLC26A5P58743 744 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 BTN3A2P78410 334 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 IRF9Q00978 393 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 ZNF33BQ06732 778 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 CHIT1Q13231 466 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 ELOAQ14241 798 aaKnown RBP13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 ACAP2Q15057 778 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 UAP1Q16222 522 aaPredicted RBP13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 HIST2H2ACQ16777 129 aaPredicted RBP13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 EIF2S3LQ2VIR3 472 aaKnown RBP13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 ACER2Q5QJU3 275 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 HIST2H2AA3Q6FI13 130 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 TRIM40Q6P9F5 258 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 FAM180AQ6UWF9 173 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 LGI4Q8N135 537 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 AMER2Q8N7J2 671 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 ARMC2Q8NEN0 867 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 KIF18AQ8NI77 898 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 SLC44A1Q8WWI5 657 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 UBE2E3Q969T4 207 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 ISL2Q96A47 359 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 MRRFQ96E11 262 aaKnown RBP13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 QRFPRQ96P65 431 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 REXO4Q9GZR2 422 aaKnown RBP13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 KCNK13Q9HB14 408 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 STMN3Q9NZ72 180 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 OPTCQ9UBM4 332 aa13.96□□□□□ -0.17
SMIM11A-203ENST00000399299 NAV2Q8IVL1 2488 aa13.96□□□□□ -0.18
SMIM11A-203ENST00000399299 SVILO95425 2214 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 A0A096LPK6 155 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 SYNDIG1LA6NDD5 238 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 SAGE2PA6NJ88 616 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 A8MUI8 341 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 E2F3O00716 465 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 B3GALT2O43825 422 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 ACSL3O95573 720 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 INHBAP08476 426 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 EDN3P14138 238 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 EPB42P16452 691 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 TYK2P29597 1187 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 SERPINB1P30740 379 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 SERPINB9P50453 376 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 TAS2R50P59544 299 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 BTG2P78543 158 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 TGM3Q08188 693 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 NAA30Q147X3 362 aaPredicted RBP13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 SETDB1Q15047 1291 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 MEP1AQ16819 746 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 UBAP2Q5T6F2 1119 aaKnown RBP13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 ADNP2Q6IQ32 1131 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 KLC3Q6P597 504 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 ABHD17CQ6PCB6 329 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 SCUBE1Q8IWY4 988 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 LAS2Q8IYD9 372 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 SLC5A8Q8N695 610 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 BCORP1Q8N888 145 aa13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 SRFBP1Q8NEF9 429 aaKnown RBP13.95□□□□□ -0.18
SMIM11A-203ENST00000399299 SUN3Q8TAQ9 357 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms