RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 PATE3B3GLJ2 98 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 B4GAT1O43505 415 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 DFNA5O60443 496 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 COX7A2P14406 83 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 ME2P23368 584 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 ATP5A1P25705 553 aaKnown RBP12.09□□□□□ -0.47
TRIM39-204ENST00000396548 HPCAL1P37235 193 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 KLC1Q07866 573 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 MUM1Q2TAK8 710 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 KLHL35Q6PF15 583 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 GPR180Q86V85 440 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 C19orf47Q8N9M1 422 aaKnown RBP12.09□□□□□ -0.47
TRIM39-204ENST00000396548 OR4C6Q8NH72 309 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 GOT1L1Q8NHS2 421 aaPredicted RBP12.09□□□□□ -0.47
TRIM39-204ENST00000396548 ITCHQ96J02 903 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 ZNF285Q96NJ3 590 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 ANKRD27Q96NW4 1050 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 PHF12Q96QT6 1004 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 TBCDQ9BTW9 1192 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 IKZF5Q9H5V7 419 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 C1GALT1Q9NS00 363 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 H0YGG7 62 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 RNASET2O00584 256 aaKnown RBP12.09□□□□□ -0.47
TRIM39-204ENST00000396548 ERN1O75460 977 aaKnown RBP12.09□□□□□ -0.47
TRIM39-204ENST00000396548 C9P02748 559 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 HIST1H1TP22492 207 aaPredicted RBP12.09□□□□□ -0.47
TRIM39-204ENST00000396548 FRKP42685 505 aaPredicted RBP12.09□□□□□ -0.47
TRIM39-204ENST00000396548 GZMMP51124 257 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 ARF3P61204 181 aaPredicted RBP12.09□□□□□ -0.47
TRIM39-204ENST00000396548 SAMD4BQ5PRF9 694 aaKnown RBP12.09□□□□□ -0.47
TRIM39-204ENST00000396548 MANEAQ5SRI9 462 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 CEP68Q76N32 757 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 TMEM132CQ8N3T6 1108 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 FAM181AQ8N9Y4 354 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 DNAJB14Q8TBM8 379 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 GAL3ST3Q96A11 431 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 ASB9Q96DX5 294 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 DUSP26Q9BV47 211 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 ADA2Q9NZK5 511 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 CROCCQ5TZA2 2017 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 YKT6O15498 198 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 CTSBP07858 339 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 PNLIPP16233 465 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 DDCP20711 480 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 PLA2G16P53816 162 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 OR1D5P58170 312 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 STXBP1P61764 594 aaKnown RBP12.08□□□□□ -0.48
TRIM39-204ENST00000396548 C2orf80Q0P641 193 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 GTDC1Q4AE62 458 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 CPTPQ5TA50 214 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 TMEM214Q6NUQ4 689 aaKnown RBP12.08□□□□□ -0.48
TRIM39-204ENST00000396548 ZCCHC8Q6NZY4 707 aaKnown RBP12.08□□□□□ -0.48
TRIM39-204ENST00000396548 RABEPKQ7Z6M1 372 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 RNF148Q8N7C7 305 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 FAM156AQ8NDB6 213 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 ARID1BQ8NFD5 2236 aaPredicted RBP12.08□□□□□ -0.48
TRIM39-204ENST00000396548 KLHL6Q8WZ60 621 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 UCN3Q969E3 161 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 MAP3K3Q99759 626 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 CPPED1Q9BRF8 314 aaPredicted RBP12.08□□□□□ -0.48
TRIM39-204ENST00000396548 TEX10Q9NXF1 929 aaPredicted RBP12.08□□□□□ -0.48
TRIM39-204ENST00000396548 A0A0J9YVX5 310 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 C1orf226A1L170 272 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 ERI3O43414 337 aaKnown RBP12.08□□□□□ -0.48
TRIM39-204ENST00000396548 KIF1CO43896 1103 aaKnown RBP12.08□□□□□ -0.48
TRIM39-204ENST00000396548 BCAS2O75934 225 aaPredicted RBP12.08□□□□□ -0.48
TRIM39-204ENST00000396548 C1QCP02747 245 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 MYF5P13349 255 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 MSX2P35548 267 aaPredicted RBP12.08□□□□□ -0.48
TRIM39-204ENST00000396548 TRPC1P48995 793 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 MAPK12P53778 367 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 GFERP55789 205 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 TRIM25Q14258 630 aaKnown RBP12.08□□□□□ -0.48
TRIM39-204ENST00000396548 NKAIN2Q5VXU1 208 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 ANKRD46Q86W74 232 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 PTRH1Q86Y79 214 aaKnown RBP12.08□□□□□ -0.48
TRIM39-204ENST00000396548 ACOT4Q8N9L9 421 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 RMND5AQ9H871 391 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 PRSS51A0A1B0GVH4 220 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 SLC9B1P1A6NJY1 282 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 RHPN2P1A8MT19 583 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 SERPIND1P05546 499 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 ZNF888P0CJ79 500 aaPredicted RBP12.08□□□□□ -0.48
TRIM39-204ENST00000396548 CD1CP29017 333 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 RPL3P39023 403 aaKnown RBP12.08□□□□□ -0.48
TRIM39-204ENST00000396548 EEFSECP57772 596 aaKnown RBP12.08□□□□□ -0.48
TRIM39-204ENST00000396548 TRAP1Q12931 704 aaKnown RBP12.08□□□□□ -0.48
TRIM39-204ENST00000396548 SQSTM1Q13501 440 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 C1orf146Q5VVC0 180 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 ARMC6Q6NXE6 501 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 R3HCC1LQ7Z5L2 792 aaKnown RBP12.08□□□□□ -0.48
TRIM39-204ENST00000396548 GATAD2AQ86YP4 633 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 CLECL1Q8IZS7 167 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 ENDOVQ8N8Q3 282 aaKnown RBP12.08□□□□□ -0.48
TRIM39-204ENST00000396548 DUSP23Q9BVJ7 150 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 EPB41L1Q9H4G0 881 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 GAREM1Q9H706 876 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 TAS2R7Q9NYW3 318 aa12.08□□□□□ -0.48
TRIM39-204ENST00000396548 MN1Q10571 1320 aaPredicted RBP12.07□□□□□ -0.48
TRIM39-204ENST00000396548 H3BMH7 237 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms