RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 PELI2Q9HAT8 420 aa14.39□□□□□ -0.11
GPC3-202ENST00000394299 C8orf4Q9NR00 106 aa14.39□□□□□ -0.11
GPC3-202ENST00000394299 ZNF282Q9UDV7 671 aaPredicted RBP14.39□□□□□ -0.11
GPC3-202ENST00000394299 TBC1D29Q9UFV1 150 aa14.39□□□□□ -0.11
GPC3-202ENST00000394299 TMEFF2Q9UIK5 374 aaPredicted RBP14.39□□□□□ -0.11
GPC3-202ENST00000394299 ICKQ9UPZ9 632 aa14.39□□□□□ -0.11
GPC3-202ENST00000394299 SMIM31A0A1B0GVY4 71 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 PRKRAO75569 313 aaKnown RBP14.38□□□□□ -0.11
GPC3-202ENST00000394299 PTGER1P34995 402 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 RAB28P51157 221 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 RPS26P62854 115 aaKnown RBP14.38□□□□□ -0.11
GPC3-202ENST00000394299 REEP5Q00765 189 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 IL1RL1Q01638 556 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 PRDX1Q06830 199 aaKnown RBP14.38□□□□□ -0.11
GPC3-202ENST00000394299 FOXD4Q12950 439 aaPredicted RBP14.38□□□□□ -0.11
GPC3-202ENST00000394299 RPE65Q16518 533 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 ERICH5Q6P6B1 374 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 EIF3MQ7L2H7 374 aaKnown RBP14.38□□□□□ -0.11
GPC3-202ENST00000394299 CYP4Z1Q86W10 505 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 FBXL6Q8N531 539 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 TMEM145Q8NBT3 493 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 TIMM29Q9BSF4 260 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 ATAD3AQ9NVI7 634 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 TEX10Q9NXF1 929 aaPredicted RBP14.38□□□□□ -0.11
GPC3-202ENST00000394299 AASSQ9UDR5 926 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 PADI4Q9UM07 663 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 GON4LQ3T8J9 2241 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 PRR19A6NJB7 356 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 CACNB4O00305 520 aaPredicted RBP14.38□□□□□ -0.11
GPC3-202ENST00000394299 NARSO43776 548 aaKnown RBP14.38□□□□□ -0.11
GPC3-202ENST00000394299 SEMG1P04279 462 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 IL7RP16871 459 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 IL1RNP18510 177 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 NDUFV2P19404 249 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 TEAD1P28347 426 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 PEBP1P30086 187 aaKnown RBP14.38□□□□□ -0.11
GPC3-202ENST00000394299 UAP1L1Q3KQV9 507 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 C10orf62Q5T681 223 aaPredicted RBP14.38□□□□□ -0.11
GPC3-202ENST00000394299 R3HCC1LQ7Z5L2 792 aaKnown RBP14.38□□□□□ -0.11
GPC3-202ENST00000394299 DCP2Q8IU60 420 aaKnown RBP14.38□□□□□ -0.11
GPC3-202ENST00000394299 ZC3H7AQ8IWR0 971 aaKnown RBP14.38□□□□□ -0.11
GPC3-202ENST00000394299 GOT1L1Q8NHS2 421 aaPredicted RBP14.38□□□□□ -0.11
GPC3-202ENST00000394299 NFKBIDQ8NI38 313 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 BMFQ96LC9 184 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 ZNF576Q9H609 170 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 CXorf36Q9H7Y0 433 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 TAS2R9Q9NYW1 312 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 SPATA7Q9P0W8 599 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 PCDHGA8Q9Y5G5 932 aa14.38□□□□□ -0.11
GPC3-202ENST00000394299 PRSS38A1L453 326 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 GPR89AB7ZAQ6 455 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 C4orf51C9J302 202 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 H0YAE9 185 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 TNFRSF21O75509 655 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 FABP3P05413 133 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 ASGR2P07307 311 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 GPR89BP0CG08 455 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 CHI3L1P36222 383 aaPredicted RBP14.37□□□□□ -0.11
GPC3-202ENST00000394299 HSD17B2P37059 387 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 OR1E2P47887 323 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 CLCN2P51788 898 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 KCNJ10P78508 379 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 VEZF1Q14119 521 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 IQCCQ4KMZ1 466 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 OR2T5Q6IEZ7 315 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 TSEN54Q7Z6J9 526 aaKnown RBP14.37□□□□□ -0.11
GPC3-202ENST00000394299 PGBD3Q8N328 593 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 SVOPLQ8N434 492 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 OR2T29Q8NH02 315 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 CXorf40BQ96DE9 158 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 TEFMQ96QE5 360 aaKnown RBP14.37□□□□□ -0.11
GPC3-202ENST00000394299 C17orf62Q9BQA9 187 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 SLC6A20Q9NP91 592 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 PAPOLBQ9NRJ5 636 aaKnown RBP14.37□□□□□ -0.11
GPC3-202ENST00000394299 C1GALT1Q9NS00 363 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 TSC22D4Q9Y3Q8 395 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 CEPT1Q9Y6K0 416 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 MYO10Q9HD67 2058 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 SNRNP200O75643 2136 aaKnown RBP14.37□□□□□ -0.11
GPC3-202ENST00000394299 CYP4B1P13584 511 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 FUT4P22083 530 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 CXCR2P25025 360 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 BCL6P41182 706 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 ALDH3B2P48448 385 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 DAPP51397 102 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 MEP1AQ16819 746 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 DGLUCYQ7Z3D6 616 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 ARL10Q8N8L6 244 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 SMRP1Q8NCR6 262 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 OR4E2Q8NGC2 313 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 CREB3L4Q8TEY5 395 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 EXOSC8Q96B26 276 aaKnown RBP14.37□□□□□ -0.11
GPC3-202ENST00000394299 RBM4BQ9BQ04 359 aaKnown RBP14.37□□□□□ -0.11
GPC3-202ENST00000394299 RBM4Q9BWF3 364 aaKnown RBP14.37□□□□□ -0.11
GPC3-202ENST00000394299 EPB41L1Q9H4G0 881 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 LIN28AQ9H9Z2 209 aaKnown RBP14.37□□□□□ -0.11
GPC3-202ENST00000394299 AHSPQ9NZD4 102 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 CD207Q9UJ71 328 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 RPS6KA6Q9UK32 745 aa14.37□□□□□ -0.11
GPC3-202ENST00000394299 GLOD5A6NK44 160 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms