RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 UPP1Q16831 310 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 LRRC26Q2I0M4 334 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 CTU2Q2VPK5 515 aaKnown RBP8.3□□□□□ -1.08
GABRA1-202ENST00000393943 PTCHD3Q3KNS1 767 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 MPPE1Q53F39 396 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 ALFQ53S48 1182 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 ESCO2Q56NI9 601 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 Q6ZSR9 355 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 MFSD6LQ8IWD5 586 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 ARRDC2Q8TBH0 407 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 TTPALQ9BTX7 342 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 RDH8Q9NYR8 311 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 MRPS7Q9Y2R9 242 aaKnown RBP8.3□□□□□ -1.08
GABRA1-202ENST00000393943 LTBP3Q9NS15 1303 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 PI15O43692 258 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 MTHFD2P13995 350 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 HSD17B2P37059 387 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 COL28A1Q2UY09 1125 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 MACC1Q6ZN28 852 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 MBOAT1Q6ZNC8 495 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 LINC01465Q8N7H1 131 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 RHBDF1Q96CC6 855 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 ATG10Q9H0Y0 220 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 ABCG8Q9H221 673 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 SLAMF8Q9P0V8 285 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 UPB1Q9UBR1 384 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 RPS6KB2Q9UBS0 482 aa8.3□□□□□ -1.08
GABRA1-202ENST00000393943 PHIPQ8WWQ0 1821 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 A0A1W2PQ09 198 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 ZNF623O75123 536 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 ECDO95905 644 aaPredicted RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 SCG5P05408 212 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 IFI30P13284 250 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 ZNF10P21506 573 aaPredicted RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 ACRV1P26436 265 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 CD52P31358 61 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 CAMK1Q14012 370 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 CBX2Q14781 532 aaPredicted RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 IDNKQ5T6J7 187 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 SDHAF4Q5VUM1 108 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 PSAPL1Q6NUJ1 521 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 NRARPQ7Z6K4 114 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 C17orf64Q86WR6 236 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 CIR1Q86X95 450 aaPredicted RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 SRFBP1Q8NEF9 429 aaKnown RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 VANGL1Q8TAA9 524 aaPredicted RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 SLC7A6Q92536 515 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 TBC1D17Q9HA65 648 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 GMPR2Q9P2T1 348 aaKnown RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 NUFIP1Q9UHK0 495 aaKnown RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 MOSPD1Q9UJG1 213 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 A0A1W2PQL4 384 aaPredicted RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 A8MV72 311 aaPredicted RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 H3BM21 787 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 RNASET2O00584 256 aaKnown RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 APOL3O95236 402 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 LRG1P02750 347 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 CSF2P04141 144 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 PFKLP17858 780 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 HOXD10P28358 340 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 PBLDP30039 288 aaPredicted RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 TIA1P31483 386 aaKnown RBP eCLIP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 SLC24A5Q71RS6 500 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 MTSS1LQ765P7 747 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 FAM220AQ7Z4H9 259 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 GID4Q8IVV7 300 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 CBARPQ8N350 705 aaPredicted RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 B3GNT7Q8NFL0 401 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 OSTF1Q92882 214 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 SNAPC3Q92966 411 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 SLC35G5Q96KT7 338 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 ENAMQ9NRM1 1142 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 GPRC5BQ9NZH0 403 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 PADI3Q9ULW8 664 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 NAALAD2Q9Y3Q0 740 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 SBF2Q86WG5 1849 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 IQCMA0A1B0GVH7 501 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 MBLAC1A4D2B0 266 aaPredicted RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 ZNF670-ZNF695F2Z2N8 137 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 PPP6CO00743 305 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 PRAF2O60831 178 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 SLC43A1O75387 559 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 POP4O95707 220 aaKnown RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 LATS1O95835 1130 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 WNT4P56705 351 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 SMAD3P84022 425 aaKnown RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 GANABQ14697 944 aaKnown RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 SLC22A10Q63ZE4 541 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 THOC6Q86W42 341 aaKnown RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 KLHDC8BQ8IXV7 354 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 TCEANCQ8N8B7 351 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 DCAF4L2Q8NA75 395 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 RPL3LQ92901 407 aaKnown RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 TMEM169Q96HH4 297 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 SLIRPQ9GZT3 109 aaKnown RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 MIR1-1HGQ9H1L0 117 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 ZDHHC6Q9H6R6 413 aa8.29□□□□□ -1.08
GABRA1-202ENST00000393943 PRDM5Q9NQX1 630 aaPredicted RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 COL16A1Q07092 1604 aaPredicted RBP8.29□□□□□ -1.08
GABRA1-202ENST00000393943 A0A0U1RQF3 1178 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms