RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 NEIL2Q969S2 332 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 LINGO1Q96FE5 620 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 PDLIM2Q96JY6 352 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 FAM167BQ9BTA0 163 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 ZDHHC11Q9H8X9 412 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 KCNJ16Q9NPI9 418 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 CLDN16Q9Y5I7 305 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 A0A0G2JMM0 328 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 A0A1W2PPB8 328 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 A0A1W2PRS3 328 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 MAGEB16A2A368 324 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 FAM221AA4D161 298 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 KIR3DP1A8MWS1 328 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 GOLGA8MH3BSY2 632 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 TGFBR3LH3BV60 316 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 KLK8O60259 260 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 PRKNO60260 465 aaPredicted RBP14.31□□□□□ -0.12
CHMP3-202ENST00000393773 MYO1DO94832 1006 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 NADKO95544 446 aaPredicted RBP14.31□□□□□ -0.12
CHMP3-202ENST00000393773 TUBB4AP04350 444 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 SERPIND1P05546 499 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 SMIM10L1P0DMW3 83 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 IST1P53990 364 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 RAB8AP61006 207 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 HSP90AA5PQ58FG0 334 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 UGT3A1Q6NUS8 523 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 PAQR3Q6TCH7 311 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 C2CD4AQ8NCU7 369 aaPredicted RBP14.31□□□□□ -0.12
CHMP3-202ENST00000393773 PSD4Q8NDX1 1056 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 SMIM10Q96HG1 83 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 RBSNQ9H1K0 784 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 CLK4Q9HAZ1 481 aaKnown RBP14.31□□□□□ -0.12
CHMP3-202ENST00000393773 ZFATQ9P243 1243 aa14.31□□□□□ -0.12
CHMP3-202ENST00000393773 TMEM200CA6NKL6 621 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 USP27XA6NNY8 438 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 PDE9AO76083 593 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 KRT14P02533 472 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 CD99P14209 185 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 GABRB3P28472 473 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 PPP2R1BP30154 601 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 SSR4P51571 173 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 GPR143P51810 404 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 AP1S2P56377 157 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 PMPCAQ10713 525 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 MYBPHQ13203 477 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 PALM2Q8IXS6 379 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 TMEM156Q8N614 296 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 SLC5A11Q8WWX8 675 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 NCLNQ969V3 563 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 FBXL8Q96CD0 374 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 VMP1Q96GC9 406 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 SIGLEC10Q96LC7 697 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 TSNARE1Q96NA8 513 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 FOXC2Q99958 501 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 RHBGQ9H310 441 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 KLHL31Q9H511 634 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 TIMMDC1Q9NPL8 285 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 IARS2Q9NSE4 1012 aaKnown RBP14.3□□□□□ -0.12
CHMP3-202ENST00000393773 PNPLA3Q9NST1 481 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 ARL15Q9NXU5 204 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 TAS2R13Q9NYV9 303 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 KCMF1Q9P0J7 381 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 FBXW2Q9UKT8 454 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 L3MBTL1Q9Y468 752 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 MMACHCQ9Y4U1 282 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 FAM215AQ9Y5M1 114 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 LIPGQ9Y5X9 500 aa14.3□□□□□ -0.12
CHMP3-202ENST00000393773 FAM166BA8MTA8 275 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 PSMD12O00232 456 aaPredicted RBP14.29□□□□□ -0.12
CHMP3-202ENST00000393773 HIST1H2AGP0C0S8 130 aaPredicted RBP14.29□□□□□ -0.12
CHMP3-202ENST00000393773 HIST1H2ADP20671 130 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 HNF4AP41235 474 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 CES4AQ5XG92 561 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 C16orf47Q6ZP98 133 aaPredicted RBP14.29□□□□□ -0.12
CHMP3-202ENST00000393773 ACAD11Q709F0 780 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 TGIF2LYQ8IUE0 185 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 TBC1D19Q8N5T2 526 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.29□□□□□ -0.12
CHMP3-202ENST00000393773 ARMC2Q8NEN0 867 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 OR2M7Q8NG81 312 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 OR5M3Q8NGP4 307 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 NINJ1Q92982 152 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 HIST1H2AHQ96KK5 128 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 HIST1H2AJQ99878 128 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 H2AFJQ9BTM1 129 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 TTTY12Q9BZ98 90 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 DEFB127Q9H1M4 99 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 PELI2Q9HAT8 420 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 HOMER3Q9NSC5 361 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 IKZF3Q9UKT9 509 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 MAD1L1Q9Y6D9 718 aa14.29□□□□□ -0.12
CHMP3-202ENST00000393773 NPIPA2E9PIF3 369 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 NPIPA3F8WFD2 350 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 ACOT7O00154 380 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 GLSO94925 669 aaPredicted RBP14.28□□□□□ -0.12
CHMP3-202ENST00000393773 ZWINTO95229 277 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 CXCR5P32302 372 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 HNRNPFP52597 415 aaKnown RBP14.28□□□□□ -0.12
CHMP3-202ENST00000393773 PGGT1BP53609 377 aa14.28□□□□□ -0.12
CHMP3-202ENST00000393773 DLX5P56178 289 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms