RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.23□□□□□ -1.09
TDP1-203ENST00000393454 GLYATQ6IB77 296 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 IRGCQ6NXR0 463 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 FAM180BQ6P0A1 224 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 ABHD17CQ6PCB6 329 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 KLHL35Q6PF15 583 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 ZNF793Q6ZN11 406 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 SRFBP1Q8NEF9 429 aaKnown RBP8.23□□□□□ -1.09
TDP1-203ENST00000393454 TNIP2Q8NFZ5 429 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 OR2T12Q8NG77 320 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 OR2L5Q8NG80 312 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 OR8K5Q8NH50 307 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 RERGQ96A58 199 aaPredicted RBP8.23□□□□□ -1.09
TDP1-203ENST00000393454 MTERF3Q96E29 417 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 ZNF583Q96ND8 569 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 KCNC2Q96PR1 638 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 TEFMQ96QE5 360 aaKnown RBP8.23□□□□□ -1.09
TDP1-203ENST00000393454 CPPED1Q9BRF8 314 aaPredicted RBP8.23□□□□□ -1.09
TDP1-203ENST00000393454 MUC13Q9H3R2 512 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 DDX31Q9H8H2 851 aaKnown RBP8.23□□□□□ -1.09
TDP1-203ENST00000393454 SYNPO2LQ9H987 977 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 COPS7BQ9H9Q2 264 aaPredicted RBP8.23□□□□□ -1.09
TDP1-203ENST00000393454 IL21RQ9HBE5 538 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 EVA1BQ9NVM1 165 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 VPS4AQ9UN37 437 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 WBP11Q9Y2W2 641 aaKnown RBP8.23□□□□□ -1.09
TDP1-203ENST00000393454 PCDHB3Q9Y5E6 796 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 SNX11Q9Y5W9 270 aa8.23□□□□□ -1.09
TDP1-203ENST00000393454 A0A1B0GTW7 788 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 TCRBV3S1A0A5B6 114 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 CLIC1O00299 241 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 RNASET2O00584 256 aaKnown RBP8.22□□□□□ -1.09
TDP1-203ENST00000393454 FKBP9O95302 570 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 C6orf47O95873 294 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 PROS1P07225 676 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 C8BP07358 591 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 FAM58BPP0C7Q3 252 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 SLC35G6P0C7Q6 338 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 DDX5P17844 614 aaKnown RBP8.22□□□□□ -1.09
TDP1-203ENST00000393454 DDCP20711 480 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 CDH3P22223 829 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 CERS1P27544 350 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 PTPN6P29350 595 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 VHLP40337 213 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 FASLGP48023 281 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 BTN3A2P78410 334 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 LRRC74AQ0VAA2 488 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 BNIP3Q12983 259 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 PDE7AQ13946 482 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 PRSS53Q2L4Q9 553 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 ADPRMQ3LIE5 342 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 LCN8Q6JVE9 175 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 DGLUCYQ7Z3D6 616 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 VN1R4Q7Z5H5 301 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 PROSER1Q86XN7 944 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 PTRH1Q86Y79 214 aaKnown RBP8.22□□□□□ -1.09
TDP1-203ENST00000393454 C1orf210Q8IVY1 113 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 CLEC4FQ8N1N0 589 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 SDR16C5Q8N3Y7 309 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 ACOT4Q8N9L9 421 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 KCT2Q8NC54 265 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 BAHD1Q8TBE0 780 aaPredicted RBP8.22□□□□□ -1.09
TDP1-203ENST00000393454 ZCCHC10Q8TBK6 192 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 PNPT1Q8TCS8 783 aaKnown RBP8.22□□□□□ -1.09
TDP1-203ENST00000393454 NRG4Q8WWG1 115 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 FIG4Q92562 907 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 EXOSC8Q96B26 276 aaKnown RBP8.22□□□□□ -1.09
TDP1-203ENST00000393454 OR2A5Q96R48 311 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 ZFYVE21Q9BQ24 234 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.22□□□□□ -1.09
TDP1-203ENST00000393454 SLC6A16Q9GZN6 736 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 ABCG4Q9H172 646 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 KAT8Q9H7Z6 458 aaKnown RBP8.22□□□□□ -1.09
TDP1-203ENST00000393454 PRMT8Q9NR22 394 aaPredicted RBP8.22□□□□□ -1.09
TDP1-203ENST00000393454 TEX10Q9NXF1 929 aaPredicted RBP8.22□□□□□ -1.09
TDP1-203ENST00000393454 C5AR2Q9P296 337 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 ANKMY1Q9P2S6 941 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 MAGEL2Q9UJ55 1249 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 FBXW2Q9UKT8 454 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 AURKCQ9UQB9 309 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 AP4S1Q9Y587 144 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 SCN3AQ9NY46 2000 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 LOC105369274A0A096LPK9 316 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 A0A0A6YYD5 115 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 LOC102723532A0A0G2JNH3 316 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 A0A1W2PRB8 838 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 ELOVL7A1L3X0 281 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 AQP12BA6NM10 295 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 RHPN2P1A8MT19 583 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 C4orf51C9J302 202 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 GPR37L1O60883 481 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 GUCY1B2O75343 617 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 NTRK1P04629 796 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 ZNF888P0CJ79 500 aaPredicted RBP8.22□□□□□ -1.09
TDP1-203ENST00000393454 HIST1H1TP22492 207 aaPredicted RBP8.22□□□□□ -1.09
TDP1-203ENST00000393454 ATP5A1P25705 553 aaKnown RBP8.22□□□□□ -1.09
TDP1-203ENST00000393454 ALDH4A1P30038 563 aa8.22□□□□□ -1.09
TDP1-203ENST00000393454 HNRNPFP52597 415 aaKnown RBP8.22□□□□□ -1.09
TDP1-203ENST00000393454 TRA2BP62995 288 aaKnown RBP8.22□□□□□ -1.09
TDP1-203ENST00000393454 MAP7Q14244 749 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms