RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 GGT1P19440 569 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 MAGP20916 626 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 STARD6P59095 220 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 RAB8AP61006 207 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 ZNF33BQ06732 778 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 PPP1R8Q12972 351 aaKnown RBP14.27□□□□□ -0.12
MKS1-202ENST00000393119 GK3PQ14409 553 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 NADK2Q4G0N4 442 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 ZFP1Q6P2D0 407 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 OR8J2Q8NGG1 315 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 FLVCR1-AS1Q8TAF5 88 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 SLC37A2Q8TED4 501 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 SLC6A16Q9GZN6 736 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 REEP4Q9H6H4 257 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 RMND5AQ9H871 391 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 COQ10BQ9H8M1 238 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 CD320Q9NPF0 282 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 SLAMF7Q9NQ25 335 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 CCM2LQ9NUG4 571 aaPredicted RBP14.27□□□□□ -0.12
MKS1-202ENST00000393119 PCDHB3Q9Y5E6 796 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 FANCMQ8IYD8 2048 aa14.27□□□□□ -0.12
MKS1-202ENST00000393119 GSAPA4D1B5 854 aa14.27□□□□□ -0.13
MKS1-202ENST00000393119 TNFRSF10CO14798 259 aa14.27□□□□□ -0.13
MKS1-202ENST00000393119 CASC3O15234 703 aaKnown RBP14.27□□□□□ -0.13
MKS1-202ENST00000393119 SDC3O75056 442 aa14.27□□□□□ -0.13
MKS1-202ENST00000393119 ERN1O75460 977 aaKnown RBP14.27□□□□□ -0.13
MKS1-202ENST00000393119 C9P02748 559 aa14.27□□□□□ -0.13
MKS1-202ENST00000393119 CCR5P51681 352 aa14.27□□□□□ -0.13
MKS1-202ENST00000393119 SRSF11Q05519 484 aaKnown RBP14.27□□□□□ -0.13
MKS1-202ENST00000393119 ILF3Q12906 894 aaKnown RBP eCLIP14.27□□□□□ -0.13
MKS1-202ENST00000393119 COX20Q5RI15 118 aa14.27□□□□□ -0.13
MKS1-202ENST00000393119 RAB42Q8N4Z0 105 aa14.27□□□□□ -0.13
MKS1-202ENST00000393119 KCT2Q8NC54 265 aa14.27□□□□□ -0.13
MKS1-202ENST00000393119 TM4SF18Q96CE8 201 aa14.27□□□□□ -0.13
MKS1-202ENST00000393119 MSANTD3Q96H12 275 aa14.27□□□□□ -0.13
MKS1-202ENST00000393119 RNF145Q96MT1 663 aa14.27□□□□□ -0.13
MKS1-202ENST00000393119 EVA1BQ9NVM1 165 aa14.27□□□□□ -0.13
MKS1-202ENST00000393119 C6orf203Q9P0P8 240 aaPredicted RBP14.27□□□□□ -0.13
MKS1-202ENST00000393119 BCAP29Q9UHQ4 241 aa14.27□□□□□ -0.13
MKS1-202ENST00000393119 DMTF1Q9Y222 760 aa14.27□□□□□ -0.13
MKS1-202ENST00000393119 DTNAQ9Y4J8 743 aa14.27□□□□□ -0.13
MKS1-202ENST00000393119 CFAP54Q96N23 3096 aa14.27□□□□□ -0.13
MKS1-202ENST00000393119 LRIT2A6NDA9 550 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 B4DGG1 531 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 NDUFS4O43181 175 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 CTSBP07858 339 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 ACPPP15309 386 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 TYRP1P17643 537 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 PRKCQQ04759 706 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 ZNF750Q32MQ0 723 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.26□□□□□ -0.13
MKS1-202ENST00000393119 ZCCHC8Q6NZY4 707 aaKnown RBP14.26□□□□□ -0.13
MKS1-202ENST00000393119 FAM46DQ8NEK8 389 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 OR4A15Q8NGL6 344 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 OR8K5Q8NH50 307 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 ZFP28Q8NHY6 868 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 GPBAR1Q8TDU6 330 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 COQ8BQ96D53 544 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 FAM120BQ96EK7 910 aaKnown RBP14.26□□□□□ -0.13
MKS1-202ENST00000393119 KLHDC7BQ96G42 594 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 PCBD2Q9H0N5 130 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 TMEM74BQ9NUR3 256 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 GPATCH2Q9NW75 528 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 TRNAU1APQ9NX07 287 aaKnown RBP14.26□□□□□ -0.13
MKS1-202ENST00000393119 CPNE7Q9UBL6 633 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 ADGRE2Q9UHX3 823 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 MUTYHQ9UIF7 546 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 PCOLCE2Q9UKZ9 415 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 MAGED1Q9Y5V3 778 aaPredicted RBP14.26□□□□□ -0.13
MKS1-202ENST00000393119 GSTA4O15217 222 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 HCRTR1O43613 425 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 CTSVO60911 334 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 KCNJ13O60928 360 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 STAMBPO95630 424 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 RPL6Q02878 288 aaKnown RBP14.26□□□□□ -0.13
MKS1-202ENST00000393119 TRIM48Q8IWZ4 208 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 UBE2E3Q969T4 207 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 NSMCE2Q96MF7 247 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 OR2A14Q96R47 310 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 LRRC61Q9BV99 259 aa14.26□□□□□ -0.13
MKS1-202ENST00000393119 MRPS26Q9BYN8 205 aaKnown RBP14.26□□□□□ -0.13
MKS1-202ENST00000393119 APOBEC3BQ9UH17 382 aaKnown RBP14.26□□□□□ -0.13
MKS1-202ENST00000393119 ELOVL7A1L3X0 281 aa14.25□□□□□ -0.13
MKS1-202ENST00000393119 C7orf72A4D263 438 aa14.25□□□□□ -0.13
MKS1-202ENST00000393119 AQP12BA6NM10 295 aa14.25□□□□□ -0.13
MKS1-202ENST00000393119 CXCR6O00574 342 aa14.25□□□□□ -0.13
MKS1-202ENST00000393119 NDUFS2O75306 463 aa14.25□□□□□ -0.13
MKS1-202ENST00000393119 CLPTM1O96005 669 aa14.25□□□□□ -0.13
MKS1-202ENST00000393119 CTSEP14091 401 aa14.25□□□□□ -0.13
MKS1-202ENST00000393119 JUNDP17535 347 aa14.25□□□□□ -0.13
MKS1-202ENST00000393119 HPCAL1P37235 193 aa14.25□□□□□ -0.13
MKS1-202ENST00000393119 MAPK12P53778 367 aa14.25□□□□□ -0.13
MKS1-202ENST00000393119 MAZP56270 477 aaKnown RBP14.25□□□□□ -0.13
MKS1-202ENST00000393119 FXNQ16595 210 aa14.25□□□□□ -0.13
MKS1-202ENST00000393119 FBXO42Q6P3S6 717 aa14.25□□□□□ -0.13
MKS1-202ENST00000393119 ANGPTL8Q6UXH0 198 aa14.25□□□□□ -0.13
MKS1-202ENST00000393119 CALHM3Q86XJ0 350 aa14.25□□□□□ -0.13
MKS1-202ENST00000393119 TMEM126BQ8IUX1 230 aa14.25□□□□□ -0.13
MKS1-202ENST00000393119 ADHFE1Q8IWW8 467 aa14.25□□□□□ -0.13
MKS1-202ENST00000393119 AQP12AQ8IXF9 295 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms