RNA–Protein interactions for RNA: ENST00000385297.1

MIR548A3-201, Transcript of microRNA 548a-3, humanhuman

BASIC

Gene MIR548A3, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A3-201ENST00000385297 NEMP2A6NFY4 417 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 CASTOR2A6NHX0 329 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 WDHD1O75717 1129 aaPredicted RBP-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 TPPPO94811 219 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 EIF2S1P05198 315 aaKnown RBP-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 VPREB1P12018 145 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 CD59P13987 128 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 CDH2P19022 906 aaPredicted RBP-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 COL8A2P25067 703 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 ALDH3B1P43353 468 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 NT5C2P49902 561 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 CAV2P51636 162 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 CXCL9Q07325 125 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 MSLNQ13421 630 aaPredicted RBP-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 TNK1Q13470 666 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 ASAH1Q13510 395 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 CYB5D1Q6P9G0 228 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 TMCO3Q6UWJ1 677 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 Q6ZVQ6 151 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 NAA40Q86UY6 237 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 ARRDC1Q8N5I2 433 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 NOA1Q8NC60 698 aaKnown RBP-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 SYN2Q92777 582 aaPredicted RBP-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 ARHGEF2Q92974 986 aaKnown RBP-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 LRRC59Q96AG4 307 aaKnown RBP-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 RBM18Q96H35 190 aaKnown RBP-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 MAELQ96JY0 434 aaKnown RBP-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 OR5M11Q96RB7 305 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 IMPAD1Q9NX62 359 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 ZNF221Q9UK13 617 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 CORO1CQ9ULV4 474 aaPredicted RBP-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 KCNE2Q9Y6J6 123 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 LRRK1Q38SD2 2015 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 TNKS1BP1Q9C0C2 1729 aaKnown RBP-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 LTBP4Q8N2S1 1624 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 SDK2Q58EX2 2172 aa-0.13□□□□□ -2.43
MIR548A3-201ENST00000385297 ZNF407Q9C0G0 2248 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 LNP1A1A4G5 178 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 FOXE1O00358 373 aaPredicted RBP-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 MCF2LO15068 1137 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 NUDT21O43809 227 aaKnown RBP-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 TGDSO95455 350 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 PDGFBP01127 241 aaPredicted RBP-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 SPARCP09486 303 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 MMP9P14780 707 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 TRIM21P19474 475 aaKnown RBP-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 CD22P20273 847 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 MPZP25189 248 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 FEN1P39748 380 aaKnown RBP-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 CETN2P41208 172 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 CD47Q08722 323 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 QRICH1Q2TAL8 776 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 RNASEH2BQ5TBB1 312 aaKnown RBP-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 NCEH1Q6PIU2 408 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 CCDC71Q8IV32 467 aaPredicted RBP-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 ZNF695Q8IW36 515 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 CCDC60Q8IWA6 550 aaPredicted RBP-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 ROBO4Q8WZ75 1007 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 HVCN1Q96D96 273 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 NXPE2Q96DL1 559 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 NRTNQ99748 197 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 NCAPGQ9BPX3 1015 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 OSBPL11Q9BXB4 747 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 SPATC1LQ9H0A9 340 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 MIEF1Q9NQG6 463 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 POLKQ9UBT6 870 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 OPN4Q9UHM6 478 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 ABT1Q9ULW3 272 aaKnown RBP-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 HBS1LQ9Y450 684 aaKnown RBP-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 CACNG2Q9Y698 323 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 SHROOM3Q8TF72 1996 aa-0.14□□□□□ -2.43
MIR548A3-201ENST00000385297 RLFQ13129 1914 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 COL5A3P25940 1745 aaPredicted RBP-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 CCDC196A0A1B0GTZ2 297 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 COLCA2A8K830 154 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 A8MVM7 634 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 LMO7DNF2Z398 122 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 TOMM70O94826 608 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 PRAMEF12O95522 483 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 C6orf47O95873 294 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 PNPP00491 289 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 LAMP1P11279 417 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 RGS2P41220 211 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 MNAT1P51948 309 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 CLDN15P56746 228 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 BTG1P62324 171 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 RPS27AP62979 156 aaKnown RBP-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 RPS6KA1Q15418 735 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 C14orf28Q4W4Y0 310 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 C5orf47Q569G3 176 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 TSPO2Q5TGU0 170 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 GKAP1Q5VSY0 366 aaPredicted RBP-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 SLC22A10Q63ZE4 541 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 KIAA0930Q6ICG6 404 aaPredicted RBP-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 CTR9Q6PD62 1173 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 SARM1Q6SZW1 724 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 CEP57Q86XR8 500 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 ARMC8Q8IUR7 673 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 TBC1D10CQ8IV04 446 aa-0.15□□□□□ -2.43
MIR548A3-201ENST00000385297 Q8N9G6 341 aaPredicted RBP-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms