RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 TUSC3Q13454 348 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 C6orf141Q5SZD1 244 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 CNTN4Q8IWV2 1026 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 LIX1Q8N485 282 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 NAT8LQ8N9F0 302 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 TRIB2Q92519 343 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 PIGKQ92643 395 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 COPS5Q92905 334 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 CELF6Q96J87 481 aaKnown RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 FCRL1Q96LA6 429 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 SECISBP2Q96T21 854 aaKnown RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 NCOR1P1Q9H4R4 102 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 ABCC13Q9NSE7 274 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 LYRM2Q9NU23 88 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 PPM1HQ9ULR3 514 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 PADI2Q9Y2J8 665 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 LTBP4Q8N2S1 1624 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 CACNA1DQ01668 2161 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 NCF1BA6NI72 391 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 NCF1CA8MVU1 366 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 TSPAN4O14817 238 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 TBL1XO60907 577 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 NCR1O76036 304 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 AK1P00568 194 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 REEP5Q00765 189 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 SLC3A1Q07837 685 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 ACSM2AQ08AH3 577 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 SSX2Q16385 188 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 HYAL4Q2M3T9 481 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 POM121L1PQ3SYA9 428 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 CPTPQ5TA50 214 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 ACSM2BQ68CK6 577 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 CCBE1Q6UXH8 406 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 ZNF227Q86WZ6 799 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 CDH26Q8IXH8 852 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 C12orf45Q8N5I9 185 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 SEMA6DQ8NFY4 1073 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 OR8K3Q8NH51 312 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 COQ8AQ8NI60 647 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 LNX1Q8TBB1 728 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 LRRC46Q96FV0 321 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 ZNF514Q96K75 400 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 FBXL18Q96ME1 805 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 ALPK1Q96QP1 1244 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 NXF2Q9GZY0 626 aaKnown RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 SLC6A17Q9H1V8 727 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 DUS2Q9NX74 493 aaKnown RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 FBXL4Q9UKA2 621 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 PHIPQ8WWQ0 1821 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 PRSS51A0A1B0GVH4 220 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 WDR27A2RRH5 827 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 CILPO75339 1184 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 HTR2BP41595 481 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 PITPNBP48739 271 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 TAS2R50P59544 299 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 RAB40BQ12829 278 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 PERM1Q5SV97 790 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 WSCD1Q658N2 575 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 B3GNTL1Q67FW5 361 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-203ENST00000381196 SPESP1Q6UW49 350 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 PRSS55Q6UWB4 352 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-203ENST00000381196 CHRDL2Q6WN34 429 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 PTCHD4Q6ZW05 846 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 SERPINA11Q86U17 422 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 BEND7Q8N7W2 519 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-203ENST00000381196 COLGALT1Q8NBJ5 622 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 SLC2A12Q8TD20 617 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 ATP13A2Q9NQ11 1180 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 SLC17A6Q9P2U8 582 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 ARVCFO00192 962 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 DGKEP52429 567 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 YBEYP58557 167 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-203ENST00000381196 PTSQ03393 145 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 SLC25A52Q3SY17 297 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 CORO6Q6QEF8 472 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 IL34Q6ZMJ4 242 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 DEF8Q6ZN54 512 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 PLPPR4Q7Z2D5 763 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 IQCHQ86VS3 1027 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 IL31RAQ8NI17 732 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 PPTC7Q8NI37 304 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 SPPL2BQ8TCT7 592 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 CORO2AQ92828 525 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 CLP1Q92989 425 aaKnown RBP4.72□□□□□ -1.65
PTPRD-203ENST00000381196 LRRC58Q96CX6 371 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 SH3YL1Q96HL8 342 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-203ENST00000381196 FAM105AQ9NUU6 356 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 TMEM181Q9P2C4 612 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 NENFQ9UMX5 172 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 WASF2Q9Y6W5 498 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 SNRNP200O75643 2136 aaKnown RBP4.72□□□□□ -1.65
PTPRD-203ENST00000381196 ZSCAN5BA6NJL1 495 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 C12orf71A8MTZ7 269 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 LACTBL1A8MY62 500 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 CHURC1-FNTBB4DL54 471 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 CASC3O15234 703 aaKnown RBP4.72□□□□□ -1.65
PTPRD-203ENST00000381196 OR6B1O95007 311 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 FGF4P08620 206 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 AKT2P31751 481 aa4.72□□□□□ -1.65
PTPRD-203ENST00000381196 PTGER3P43115 390 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms