RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 PRRT3Q5FWE3 981 aa18.93■□□□□ 0.62
PDLIM5-205ENST00000380180 ZNF425Q6IV72 752 aa18.93■□□□□ 0.62
PDLIM5-205ENST00000380180 AMER3Q8N944 861 aa18.93■□□□□ 0.62
PDLIM5-205ENST00000380180 VPS50Q96JG6 964 aa18.93■□□□□ 0.62
PDLIM5-205ENST00000380180 BDH2Q9BUT1 245 aa18.93■□□□□ 0.62
PDLIM5-205ENST00000380180 SARGQ9BW04 601 aa18.93■□□□□ 0.62
PDLIM5-205ENST00000380180 ABCG4Q9H172 646 aa18.93■□□□□ 0.62
PDLIM5-205ENST00000380180 DDX31Q9H8H2 851 aaKnown RBP18.93■□□□□ 0.62
PDLIM5-205ENST00000380180 ADAM29Q9UKF5 820 aa18.93■□□□□ 0.62
PDLIM5-205ENST00000380180 WBP11Q9Y2W2 641 aaKnown RBP18.93■□□□□ 0.62
PDLIM5-205ENST00000380180 AP1M2Q9Y6Q5 423 aa18.93■□□□□ 0.62
PDLIM5-205ENST00000380180 IGHV1OR15-9A0A0B4J2B8 117 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 A0A1W2PRB8 838 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 AHRP35869 848 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 HYAL2Q12891 473 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 TMTC4Q5T4D3 741 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 FAM180BQ6P0A1 224 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 ERICH5Q6P6B1 374 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 PACRGLQ8N7B6 248 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 FAM47BQ8NA70 645 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 PATE1Q8WXA2 126 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 TEFMQ96QE5 360 aaKnown RBP18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 C17orf62Q9BQA9 187 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 ORAI3Q9BRQ5 295 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 FOXQ1Q9C009 403 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 CHST8Q9H2A9 424 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 YY1AP1Q9H869 796 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 LTB4R2Q9NPC1 389 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 OLAHQ9NV23 265 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 TAS2R9Q9NYW1 312 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 UTS2RQ9UKP6 389 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 SNX7Q9UNH6 387 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 CORO2BQ9UQ03 480 aa18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 MRPS17Q9Y2R5 130 aaKnown RBP18.92■□□□□ 0.62
PDLIM5-205ENST00000380180 RNF103-CHMP3A0A140T963 221 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 FAM170BA6NMN3 283 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 ZNF217O75362 1048 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 NUDT7P0C024 238 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 ALDH9A1P49189 494 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 FZD2Q14332 565 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 HEPACAMQ14CZ8 416 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 PLCL1Q15111 1095 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 Q7L0L9 218 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 SPRED1Q7Z699 444 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 TBC1D19Q8N5T2 526 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 SYNPO2LQ9H987 977 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 NTN4Q9HB63 628 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 UBAP1Q9NZ09 502 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 DEAF1O75398 565 aaPredicted RBP18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 GPR18Q14330 331 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 TMEM35AQ53FP2 167 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 TRIM48Q8IWZ4 208 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 NAGSQ8N159 534 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 TRIML2Q8N7C3 387 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 OR10Q1Q8NGQ4 319 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 SLC22A18Q96BI1 424 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 CNBD2Q96M20 576 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 SLC35A5Q9BS91 424 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 OSBPL11Q9BXB4 747 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 GSDMCQ9BYG8 508 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 GPR27Q9NS67 375 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 GPATCH2Q9NW75 528 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 TEX10Q9NXF1 929 aaPredicted RBP18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 SCOCQ9UIL1 159 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 PCDHGA4Q9Y5G9 962 aa18.91■□□□□ 0.62
PDLIM5-205ENST00000380180 RASAL1O95294 804 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 CELA2BP08218 269 aaPredicted RBP18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 IL1RNP18510 177 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 GSTM2P28161 218 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 SSR2P43308 183 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 PXNP49023 591 aaPredicted RBP18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 MVDP53602 400 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 ADPRMQ3LIE5 342 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 LRRC23Q53EV4 343 aaPredicted RBP18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 UGT2A3Q6UWM9 527 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 ANGPTL8Q6UXH0 198 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 ZNF793Q6ZN11 406 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 SFTPA2Q8IWL1 248 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 MFSD9Q8NBP5 474 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 FLVCR1-AS1Q8TAF5 88 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 MS4A6EQ96DS6 147 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 KLHDC7BQ96G42 594 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 PYURFQ96I23 114 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 TRIM4Q9C037 500 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 DLGAP2Q9P1A6 1054 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 PCDHGB5Q9Y5G0 923 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 ABCA7Q8IZY2 2146 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 A0A0A6YYD5 115 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 UPK1AO00322 258 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 TBX19O60806 448 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 PRSS23O95084 383 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 VIPP01282 170 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 KDELR2P33947 212 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 NUDT1P36639 197 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 CASP9P55211 416 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 GK3PQ14409 553 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 KIR2DS3Q14952 304 aa18.9■□□□□ 0.62
PDLIM5-205ENST00000380180 COX20Q5RI15 118 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms