RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 WDR45Q9Y484 360 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 GFRA2O00451 464 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 CCR7P32248 378 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 TDGQ13569 410 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 ZNF765Q7L2R6 523 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 EHD3Q9NZN3 535 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 KLRF1Q9NZS2 232 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 PRLHRP49683 370 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 ZNF33BQ06732 778 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 CTSL3PQ5NE16 218 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 LCN1P1Q5VSP4 162 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 OR52E4Q8NGH9 312 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 SMPDL3BQ92485 455 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 RNH1P13489 461 aaKnown RBP20.37■□□□□ 0.85
SKI-201ENST00000378536 ETV4P43268 484 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 CLDN8P56748 225 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 PCDH1Q08174 1060 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 CYBRD1Q53TN4 286 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 SNX33Q8WV41 574 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 RAB8BQ92930 207 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 GSTO2Q9H4Y5 243 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 PRODH2Q9UF12 536 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 DAPK2Q9UIK4 370 aa20.37■□□□□ 0.85
SKI-201ENST00000378536 CCSAPQ6IQ19 270 aaPredicted RBP20.36■□□□□ 0.85
SKI-201ENST00000378536 ASB16Q96NS5 453 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 TMEM30AQ9NV96 361 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 OR52A4PA6NMU1 304 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 TLX3O43711 291 aaPredicted RBP20.36■□□□□ 0.85
SKI-201ENST00000378536 TBX10O75333 385 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 CKMT2P17540 419 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 KLHL24Q6TFL4 600 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 LINC00471Q8N535 108 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 ZNF483Q8TF39 744 aaPredicted RBP20.36■□□□□ 0.85
SKI-201ENST00000378536 SDHAF3Q9NRP4 125 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 ZDHHC11BP0C7U3 371 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 BLOC1S3Q6QNY0 202 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 DCP2Q8IU60 420 aaKnown RBP20.36■□□□□ 0.85
SKI-201ENST00000378536 PACRGLQ8N7B6 248 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 SUN3Q8TAQ9 357 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 ARRDC3Q96B67 414 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 GIN1Q9NXP7 522 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 PRSS38A1L453 326 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 RTCAO00442 366 aaKnown RBP20.36■□□□□ 0.85
SKI-201ENST00000378536 NUAK1O60285 661 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 PRLP01236 227 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 GSTM3P21266 225 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 MAPK11Q15759 364 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 ZNF761Q86XN6 746 aaPredicted RBP20.36■□□□□ 0.85
SKI-201ENST00000378536 ZUFSPQ96AP4 578 aa20.36■□□□□ 0.85
SKI-201ENST00000378536 THAP10Q9P2Z0 257 aaPredicted RBP20.36■□□□□ 0.85
SKI-201ENST00000378536 PROS1P07225 676 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 ST3GAL3Q11203 375 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 PUS10Q3MIT2 529 aaKnown RBP20.35■□□□□ 0.85
SKI-201ENST00000378536 OR52E8Q6IFG1 317 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 LCTLQ6UWM7 567 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 AP3S1Q92572 193 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 C1GALT1C1Q96EU7 318 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 ENTPD2Q9Y5L3 495 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 SCAMP2O15127 329 aaKnown RBP20.35■□□□□ 0.85
SKI-201ENST00000378536 HTR6P50406 440 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 POU6F2P78424 691 aaPredicted RBP20.35■□□□□ 0.85
SKI-201ENST00000378536 TMEM44Q2T9K0 475 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 KLHDC8AQ8IYD2 350 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 LRRC25Q8N386 305 aaPredicted RBP20.35■□□□□ 0.85
SKI-201ENST00000378536 WFDC5Q8TCV5 224 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 PBX4Q9BYU1 374 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 MERTKQ12866 999 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 LETMD1Q6P1Q0 360 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 RABEPKQ7Z6M1 372 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 ELSPBP1Q96BH3 223 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 MSANTD3Q96H12 275 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 RPRD1BQ9NQG5 326 aaKnown RBP20.35■□□□□ 0.85
SKI-201ENST00000378536 OR5F1O95221 314 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 AOAHP28039 575 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 OR8K5Q8NH50 307 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 SLC25A36Q96CQ1 311 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 ZNF624Q9P2J8 865 aaPredicted RBP20.35■□□□□ 0.85
SKI-201ENST00000378536 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.35■□□□□ 0.851e-6■■■□□ 16.5
SKI-201ENST00000378536 POFUT2Q9Y2G5 429 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 WBP11Q9Y2W2 641 aaKnown RBP20.35■□□□□ 0.85
SKI-201ENST00000378536 EMC8O43402 210 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 DFNA5O60443 496 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 C9P02748 559 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 GSTT1P30711 240 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 FADDQ13158 208 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 KIAA0100Q14667 2235 aaKnown RBP20.35■□□□□ 0.85
SKI-201ENST00000378536 C7orf57Q8NEG2 295 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 BBS10Q8TAM1 723 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 NODALQ96S42 347 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 TIMM29Q9BSF4 260 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 MKL2Q9ULH7 1088 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 IRAK3Q9Y616 596 aa20.35■□□□□ 0.85
SKI-201ENST00000378536 FGF4P08620 206 aa20.34■□□□□ 0.85
SKI-201ENST00000378536 LYSMD4Q5XG99 296 aa20.34■□□□□ 0.85
SKI-201ENST00000378536 RBM12BQ8IXT5 1001 aaKnown RBP20.34■□□□□ 0.85
SKI-201ENST00000378536 PHOSPHO1Q8TCT1 267 aa20.34■□□□□ 0.85
SKI-201ENST00000378536 RLN3Q8WXF3 142 aa20.34■□□□□ 0.85
SKI-201ENST00000378536 AURKBQ96GD4 344 aaPredicted RBP20.34■□□□□ 0.85
SKI-201ENST00000378536 RPF2Q9H7B2 306 aaKnown RBP20.34■□□□□ 0.85
SKI-201ENST00000378536 LYNP07948 512 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms