RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 PIGWQ7Z7B1 504 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 NUDT13Q86X67 352 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 SHISA5Q8N114 240 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 OR9A4Q8NGU2 314 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 METTL2AQ96IZ6 378 aaKnown RBP20.2■□□□□ 0.82
CBWD3-202ENST00000377342 TBCDQ9BTW9 1192 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 NDC1Q9BTX1 674 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 CCDC28BQ9BUN5 200 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 EBPLQ9BY08 206 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 DDX31Q9H8H2 851 aaKnown RBP20.2■□□□□ 0.82
CBWD3-202ENST00000377342 NAALAD2Q9Y3Q0 740 aa20.2■□□□□ 0.82
CBWD3-202ENST00000377342 TMEM184BQ9Y519 407 aaPredicted RBP20.2■□□□□ 0.82
CBWD3-202ENST00000377342 POLR3HQ9Y535 204 aaPredicted RBP20.2■□□□□ 0.82
CBWD3-202ENST00000377342 A0A0A6YYC8 382 aaPredicted RBP20.19■□□□□ 0.82
CBWD3-202ENST00000377342 ZNF860A6NHJ4 632 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 I3L1I5 382 aaPredicted RBP20.19■□□□□ 0.82
CBWD3-202ENST00000377342 LBPP18428 481 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 HIST1H1TP22492 207 aaPredicted RBP20.19■□□□□ 0.82
CBWD3-202ENST00000377342 ATP5A1P25705 553 aaKnown RBP20.19■□□□□ 0.82
CBWD3-202ENST00000377342 TSFMP43897 325 aaKnown RBP20.19■□□□□ 0.82
CBWD3-202ENST00000377342 ARFIP2P53365 341 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 ERVK-8P63133 956 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 BTN3A2P78410 334 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 TGM3Q08188 693 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 NDUFA9Q16795 377 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 YOD1Q5VVQ6 348 aaPredicted RBP20.19■□□□□ 0.82
CBWD3-202ENST00000377342 RHBDD2Q6NTF9 364 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 FOXR1Q6PIV2 292 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 ACAD11Q709F0 780 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 METTL27Q8N6F8 245 aaPredicted RBP20.19■□□□□ 0.82
CBWD3-202ENST00000377342 FNDC5Q8NAU1 212 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 SRFBP1Q8NEF9 429 aaKnown RBP20.19■□□□□ 0.82
CBWD3-202ENST00000377342 DDA1Q9BW61 102 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 ACTR5Q9H9F9 607 aaPredicted RBP20.19■□□□□ 0.82
CBWD3-202ENST00000377342 SRPK3Q9UPE1 567 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 A0A1B0GX78 115 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 C9orf172C9J069 976 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 E9PBE3 544 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 DSCR3O14972 297 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 TMPRSS11DO60235 418 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 PCDH7O60245 1069 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 KLHL41O60662 606 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 DNAJB6O75190 326 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 NSA2O95478 260 aaKnown RBP20.19■□□□□ 0.82
CBWD3-202ENST00000377342 PUM1Q14671 1186 aaKnown RBP eCLIP20.19■□□□□ 0.82
CBWD3-202ENST00000377342 FAM214AQ32MH5 1076 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 NUP210LQ5VU65 1888 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 NXNQ6DKJ4 435 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 CEACAM20Q6UY09 585 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 ACOT4Q8N9L9 421 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 CEP70Q8NHQ1 597 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 TAAR9Q96RI9 348 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 ANKHQ9HCJ1 492 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 AHSPQ9NZD4 102 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 ADAM29Q9UKF5 820 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 PCDHGA3Q9Y5H0 932 aa20.19■□□□□ 0.82
CBWD3-202ENST00000377342 AKAP13Q12802 2813 aa20.18■□□□□ 0.82
CBWD3-202ENST00000377342 SGK494L7N484 410 aa20.18■□□□□ 0.82
CBWD3-202ENST00000377342 KLK1P06870 262 aa20.18■□□□□ 0.82
CBWD3-202ENST00000377342 SDC1P18827 310 aa20.18■□□□□ 0.82
CBWD3-202ENST00000377342 TACR1P25103 407 aa20.18■□□□□ 0.82
CBWD3-202ENST00000377342 ARSFP54793 590 aa20.18■□□□□ 0.82
CBWD3-202ENST00000377342 DIO3P55073 304 aa20.18■□□□□ 0.82
CBWD3-202ENST00000377342 EMX2Q04743 252 aa20.18■□□□□ 0.82
CBWD3-202ENST00000377342 SMU1Q2TAY7 513 aa20.18■□□□□ 0.82
CBWD3-202ENST00000377342 DCAF12Q5T6F0 453 aa20.18■□□□□ 0.82
CBWD3-202ENST00000377342 ZNF385CQ66K41 422 aaPredicted RBP20.18■□□□□ 0.82
CBWD3-202ENST00000377342 NOXRED1Q6NXP6 359 aa20.18■□□□□ 0.82
CBWD3-202ENST00000377342 RIPOR1Q6ZS17 1223 aa20.18■□□□□ 0.82
CBWD3-202ENST00000377342 ZCCHC7Q8N3Z6 543 aaKnown RBP20.18■□□□□ 0.82
CBWD3-202ENST00000377342 MARK4Q96L34 752 aa20.18■□□□□ 0.82
CBWD3-202ENST00000377342 ASIC5Q9NY37 505 aa20.18■□□□□ 0.82
CBWD3-202ENST00000377342 MCM8Q9UJA3 840 aa20.18■□□□□ 0.82
CBWD3-202ENST00000377342 TMED5Q9Y3A6 229 aa20.18■□□□□ 0.82
CBWD3-202ENST00000377342 PCDHGA8Q9Y5G5 932 aa20.18■□□□□ 0.82
CBWD3-202ENST00000377342 SCN2AQ99250 2005 aa20.18■□□□□ 0.82
CBWD3-202ENST00000377342 RDH16O75452 317 aa20.17■□□□□ 0.82
CBWD3-202ENST00000377342 NTRK1P04629 796 aa20.17■□□□□ 0.82
CBWD3-202ENST00000377342 ACPPP15309 386 aa20.17■□□□□ 0.82
CBWD3-202ENST00000377342 RORAP35398 523 aa20.17■□□□□ 0.82
CBWD3-202ENST00000377342 MTTPP55157 894 aa20.17■□□□□ 0.82
CBWD3-202ENST00000377342 OLR1P78380 273 aa20.17■□□□□ 0.82
CBWD3-202ENST00000377342 C1orf189Q5VU69 101 aa20.17■□□□□ 0.82
CBWD3-202ENST00000377342 OR5T3Q8NGG3 340 aa20.17■□□□□ 0.82
CBWD3-202ENST00000377342 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.17■□□□□ 0.82
CBWD3-202ENST00000377342 MVB12AQ96EY5 273 aa20.17■□□□□ 0.82
CBWD3-202ENST00000377342 GBP5Q96PP8 586 aa20.17■□□□□ 0.82
CBWD3-202ENST00000377342 SERINC2Q96SA4 455 aa20.17■□□□□ 0.82
CBWD3-202ENST00000377342 COPS7BQ9H9Q2 264 aaPredicted RBP20.17■□□□□ 0.82
CBWD3-202ENST00000377342 FOXJ2Q9P0K8 574 aa20.17■□□□□ 0.82
CBWD3-202ENST00000377342 AHCTF1Q8WYP5 2266 aa20.17■□□□□ 0.82
CBWD3-202ENST00000377342 CPNE3O75131 537 aaKnown RBP20.16■□□□□ 0.82
CBWD3-202ENST00000377342 KIAA0754O94854 1291 aa20.16■□□□□ 0.82
CBWD3-202ENST00000377342 BCKDHAP12694 445 aa20.16■□□□□ 0.82
CBWD3-202ENST00000377342 HNRNPH2P55795 449 aaKnown RBP20.16■□□□□ 0.82
CBWD3-202ENST00000377342 GABREP78334 506 aa20.16■□□□□ 0.82
CBWD3-202ENST00000377342 CBX1P83916 185 aa20.16■□□□□ 0.82
CBWD3-202ENST00000377342 CAMK2BQ13554 666 aa20.16■□□□□ 0.82
CBWD3-202ENST00000377342 RUNX2Q13950 521 aa20.16■□□□□ 0.82
CBWD3-202ENST00000377342 IL23RQ5VWK5 629 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms