RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 TNFRSF12AQ9NP84 129 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 DIABLOQ9NR28 239 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 TAS2R7Q9NYW3 318 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 HCSTQ9UBK5 93 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 A0A1W2PPK0 400 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 TMX2-CTNND1H3BSU7 103 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 MUSKO15146 869 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 LEFTY1O75610 366 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ATXN1LP0C7T5 689 aaKnown RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 CD40LGP29965 261 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 CRISP3P54108 245 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 BTN3A2P78410 334 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 LGALS3BPQ08380 585 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ARL9Q6T311 187 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 PIANPQ8IYJ0 282 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ZNF563Q8TA94 476 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ZSCAN5AQ9BUG6 496 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 GSDMCQ9BYG8 508 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 SPATA7Q9P0W8 599 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 NFKBIL1Q9UBC1 381 aaPredicted RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 RBM47A0AV96 593 aaKnown RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ACP5P13686 325 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 HRH2P25021 359 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 CD47Q08722 323 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 BIKQ13323 160 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 SMN1Q16637 294 aaKnown RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 CCDC157Q569K6 752 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 SNAP47Q5SQN1 464 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ADNP2Q6IQ32 1131 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 SLC36A4Q6YBV0 504 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 Q6ZPB1 254 aaPredicted RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ZBED6CLQ96FA7 236 aaPredicted RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 C1QTNF7Q9BXJ2 289 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 DHFRP00374 187 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 LAG3P18627 525 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 HTR1BP28222 390 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ACSL1P33121 698 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 RCVRNP35243 200 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 CTSOP43234 321 aaPredicted RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 INHBCP55103 352 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 RGMAQ96B86 450 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 PGAP3Q96FM1 320 aaPredicted RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ASPNQ9BXN1 380 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 NECTIN3Q9NQS3 549 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 C5AR2Q9P296 337 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 WNT6Q9Y6F9 365 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 DNAJC25-GNG10A0A024R161 153 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 J3KTA2 159 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 INPPL1O15357 1258 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 AOC2O75106 756 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 CD72P21854 359 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 TBPL1P62380 186 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 RPA4Q13156 261 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 RCAN2Q14206 197 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 RTP2Q5QGT7 225 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 SLC5A8Q8N695 610 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 NKD1Q969G9 470 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 SH3YL1Q96HL8 342 aaPredicted RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 B4GALT6Q9UBX8 382 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 PPIEQ9UNP9 301 aaKnown RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 DLGAP4Q9Y2H0 992 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 GPR52Q9Y2T5 361 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 MID1O15344 667 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ERI3O43414 337 aaKnown RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 STC2O76061 302 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 PGDP52209 483 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 PRR5P85299 388 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ADAM15Q13444 863 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 VMACQ2NL98 169 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 FCRLBQ6BAA4 426 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 TMEM207Q6UWW9 146 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 TAS1R1Q7RTX1 841 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 OAFQ86UD1 273 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 Q8N9G6 341 aaPredicted RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 CHDHQ8NE62 594 aaPredicted RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ATP6V1C2Q8NEY4 427 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 TTLL2Q9BWV7 592 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ACPTQ9BZG2 426 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 KCNN2Q9H2S1 579 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 OR51I1Q9H343 314 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 REEP4Q9H6H4 257 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ANKHQ9HCJ1 492 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 IL1RAPQ9NPH3 570 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 OLAHQ9NV23 265 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 GNG8Q9UK08 70 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 IKZF2Q9UKS7 526 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ISPDA4D126 451 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 UPK1BO75841 260 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 CAPNS1P04632 268 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 CTSEP14091 401 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 EDNRAP25101 427 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 CD70P32970 193 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 PNLIPRP1P54315 467 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 SNRPD2P62316 118 aaKnown RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 EMX1Q04741 257 aaPredicted RBP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.3□□□□□ -1.4
SMC1A-202ENST00000375340 SLCO4A1Q96BD0 722 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 IL17FQ96PD4 163 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 KLHL31Q9H511 634 aa6.3□□□□□ -1.4
SMC1A-202ENST00000375340 ELOVL2Q9NXB9 296 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms